RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PRSS3P35030 304 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 SLC35E3Q7Z769 313 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 C11orf44Q8N8P7 122 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 NPBQ8NG41 125 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 RASL11BQ9BPW5 248 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 IFT46Q9NQC8 304 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 NECAP2Q9NVZ3 263 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 CCDC59Q9P031 241 aaKnown RBP8.89□□□□□ -0.99
ERCC8-208ENST00000497892 ADAM30Q9UKF2 790 aa8.89□□□□□ -0.99
ERCC8-208ENST00000497892 RBM7Q9Y580 266 aaKnown RBP8.89□□□□□ -0.99
ERCC8-208ENST00000497892 SMIM31A0A1B0GVY4 71 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 H7C2Y5 167 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 M0QZ24 198 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 KCNAB3O43448 404 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 NDUFA3O95167 84 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 APOA2P02652 100 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 IGKV1-16P04430 117 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 FCER2P06734 321 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 CD28P10747 220 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 NAT1P18440 290 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 CNTFRP26992 372 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 LUMP51884 338 aaPredicted RBP8.88□□□□□ -0.99
ERCC8-208ENST00000497892 LINC00205P59089 165 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 PDPNQ86YL7 162 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 FOXRED2Q8IWF2 684 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 ZNF645Q8N7E2 425 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 OR5AP2Q8NGF4 316 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 GPX8Q8TED1 209 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 SCPEP1Q9HB40 452 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 MRPS7Q9Y2R9 242 aaKnown RBP8.88□□□□□ -0.99
ERCC8-208ENST00000497892 CEPT1Q9Y6K0 416 aa8.88□□□□□ -0.99
ERCC8-208ENST00000497892 IGKV1D-13A0A0B4J2D9 117 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 AP4M1O00189 453 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 SLC22A5O76082 557 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 TPPPO94811 219 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 IGLV2-14P01704 120 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 HLA-DRB1P01911 266 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 IGKV1-13P0DP09 117 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
ERCC8-208ENST00000497892 THBS3P49746 956 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 CDK10Q15131 360 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 C5orf64Q2M2E5 130 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 C2orf68Q2NKX9 166 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 HIST2H2BDQ6DRA6 164 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 CENPVQ7Z7K6 275 aaPredicted RBP8.87□□□□□ -0.99
ERCC8-208ENST00000497892 SNX29P2Q8IUI4 249 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 LAX1Q8IWV1 398 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 OR5AU1Q8NGC0 362 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 CHPT1Q8WUD6 406 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 DDB2Q92466 427 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 RNF5Q99942 180 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 HSPB9Q9BQS6 159 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 RBM38Q9H0Z9 239 aaKnown RBP8.87□□□□□ -0.99
ERCC8-208ENST00000497892 MIXL1Q9H2W2 232 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 KIAA1456Q9P272 454 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 EXTL2Q9UBQ6 330 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 ZNF107Q9UII5 783 aaPredicted RBP8.87□□□□□ -0.99
ERCC8-208ENST00000497892 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
ERCC8-208ENST00000497892 PSMB11A5LHX3 300 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 LINC01548A6NM66 108 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 J3QRK9 145 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 RRHO14718 337 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 SPDEFO95238 335 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 TSPAN15O95858 294 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 PPYP01298 95 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 OR5H8P0DN80 308 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 AADACP22760 399 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 FCGR2CP31995 323 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 TAS2R46P59540 309 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 TAGLNQ01995 201 aaKnown RBP8.86□□□□□ -0.99
ERCC8-208ENST00000497892 MSMO1Q15800 293 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 TCTEX1D4Q5JR98 221 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 STPG2Q8N412 459 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 OR4X2Q8NGF9 303 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 ADTRPQ96IZ2 230 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 NOL4LQ96MY1 436 aaPredicted RBP8.86□□□□□ -0.99
ERCC8-208ENST00000497892 CITED2Q99967 270 aaPredicted RBP8.86□□□□□ -0.99
ERCC8-208ENST00000497892 SLIRPQ9GZT3 109 aaKnown RBP8.86□□□□□ -0.99
ERCC8-208ENST00000497892 SLC35D1Q9NTN3 355 aa8.86□□□□□ -0.99
ERCC8-208ENST00000497892 RBMX2Q9Y388 322 aaKnown RBP8.86□□□□□ -0.99
ERCC8-208ENST00000497892 A6NHS1 94 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 LINC00473A8K010 186 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 SULT1C2O00338 296 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 CTDSP2O14595 271 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 RGS5O15539 181 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 IGF1P05019 195 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 RCVRNP35243 200 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 CD83Q01151 205 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 EIF4EBP1Q13541 118 aaPredicted RBP8.85□□□□□ -0.99
ERCC8-208ENST00000497892 DYRK1AQ13627 763 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 PSG5Q15238 335 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 ZNF660Q6AZW8 331 aaPredicted RBP8.85□□□□□ -0.99
ERCC8-208ENST00000497892 LIN54Q6MZP7 749 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 KCTD9Q7L273 389 aa8.85□□□□□ -0.99
ERCC8-208ENST00000497892 OVCH2Q7RTZ1 564 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms