RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 UCP2P55851 309 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 BSXQ3C1V8 233 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 C1orf87Q8N0U7 546 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 MOB3AQ96BX8 217 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 MAGT1Q9H0U3 335 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 H3BQ15 152 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 SCGB1A1P11684 91 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 KITLGP21583 273 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 RPL29P47914 159 aaKnown RBP9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 FOXF2Q12947 444 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 H1FOOQ8IZA3 346 aaPredicted RBP9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 CNEP1R1Q8N9A8 125 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 RAB39BQ96DA2 213 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 PBDC1Q9BVG4 233 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 Q9N2K0 584 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 FRYQ5TBA9 3013 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 PHF1O43189 567 aaPredicted RBP9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 SYNGR1O43759 233 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 OR2T2Q6IF00 324 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 TEX38Q6PEX7 206 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 SLC22A25Q6T423 547 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 GAPTQ8N292 157 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 SLC35G3Q8N808 338 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 OR2G3Q8NGZ4 309 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 Q8WTZ3 238 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 MUCL1Q96DR8 90 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 NAA60Q9H7X0 242 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 POLDIP2Q9Y2S7 368 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 FAM215AQ9Y5M1 114 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 M0QZ24 198 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 RHBDL1O75783 438 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 HPRT1P00492 218 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 MBNL2Q5VZF2 373 aaKnown RBP9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 WDR86Q86TI4 376 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 COMMD1Q8N668 190 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 LRTM2Q8N967 370 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 SLC25A40Q8TBP6 338 aa9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 RPUSD4Q96CM3 377 aaKnown RBP9.76□□□□□ -0.85
SNRNP200-208ENST00000497539 C1QTNF9BB2RNN3 333 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 ST8SIA3O43173 380 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 OR7C1O76099 320 aaPredicted RBP9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 ATP6V0CP27449 155 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 MDH2P40926 338 aaKnown RBP9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 ERVFRD-1P60508 538 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 UBE2KP61086 200 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 RND3P61587 244 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 PAX5Q02548 391 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 CXorf67Q86X51 503 aaPredicted RBP9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 FAM58AQ8N1B3 248 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 TMEM217Q8N7C4 229 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 FAM57AQ8TBR7 257 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 SFXN3Q9BWM7 321 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF442Q9H7R0 627 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 HES4Q9HCC6 221 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 SLC25A15Q9Y619 301 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 IGHV2-70DA0A0C4DH43 119 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 RBFOX3A6NFN3 312 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 B9A039 149 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 K7N7A8 449 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 TNFSF12O43508 249 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 CST7O76096 145 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 CA6P23280 308 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 PDLIM4P50479 330 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 RUNX1Q01196 453 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 EWSR1Q01844 656 aaKnown RBP eCLIP9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 RBPJQ06330 500 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 C4orf17Q53FE4 359 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 Q6P435 159 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
SNRNP200-208ENST00000497539 KIR2DS1A0A191URI9 304 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 NKX2-6A6NCS4 301 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 NPIPB11E5RHQ5 1161 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 MMP23AO75900 390 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 TRGC2P03986 189 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 WNT2P09544 360 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 PGA5P0DJD9 388 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 DUSP1P28562 367 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 GNRHRP30968 328 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 KIR2DS4P43632 304 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 PSG7Q13046 419 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 KIR2DS1Q14954 304 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 LIAT1Q6ZQX7 453 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 OR8G5Q8NG78 346 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 MSI2Q96DH6 328 aaKnown RBP9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 SLC35E1Q96K37 410 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 CST9LQ9H4G1 147 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 PITPNC1Q9UKF7 332 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF292O60281 2723 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 IGSF23A1L1A6 192 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 TUSC2O75896 110 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 AMBPP02760 352 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 CECR9P0C854 216 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 MDKP21741 143 aaPredicted RBP9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 LMO1P25800 156 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 LGALS7P47929 136 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 ELOBQ15370 118 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms