RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SPDEFO95238 335 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 TFAP2AP05549 437 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 MYL9P24844 172 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 ZNF260Q3ZCT1 412 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 C22orf42Q6IC83 251 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 TCTEX1D1Q8N7M0 179 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 ABHD5Q8WTS1 349 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 CLCC1Q96S66 551 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 ZMAT5Q9UDW3 170 aaKnown RBP11.05□□□□□ -0.64
VTI1A-209ENST00000496445 ZNF230Q9UIE0 474 aaPredicted RBP11.05□□□□□ -0.64
VTI1A-209ENST00000496445 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
VTI1A-209ENST00000496445 LSM4Q9Y4Z0 139 aaKnown RBP11.05□□□□□ -0.64
VTI1A-209ENST00000496445 A0A075B6Q4 140 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 TRBV6-7A0A0A0MS04 114 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 SMIM30A4D0T7 59 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 M0R1X1 148 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 ARPC1BO15143 372 aaKnown RBP11.04□□□□□ -0.64
VTI1A-209ENST00000496445 LGALS1P09382 135 aaKnown RBP11.04□□□□□ -0.64
VTI1A-209ENST00000496445 HIST1H1DP16402 221 aaKnown RBP11.04□□□□□ -0.64
VTI1A-209ENST00000496445 RAB3BP20337 219 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 RAB6AP20340 208 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 ECI1P42126 302 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 RANBP1P43487 201 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 SERPINB10P48595 397 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 UBE2UQ5VVX9 321 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 ZNF562Q6V9R5 426 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 PPP1R27Q86WC6 154 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-209ENST00000496445 OR2D2Q9H210 308 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
VTI1A-209ENST00000496445 ELF5Q9UKW6 265 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-209ENST00000496445 DYNC2H1Q8NCM8 4307 aaKnown RBP11.04□□□□□ -0.64
VTI1A-209ENST00000496445 LYSTQ99698 3801 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 IGHV4OR15-8A0A075B7B6 117 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 A0A087WW49 117 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 SLC25A17O43808 307 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 DIRAS3O95661 229 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 IGLV2-23P01705 113 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 APOA2P02652 100 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 OR8U9P0C7N5 309 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 GALP22466 123 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 SLURP1P55000 103 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 RPS16P62249 146 aaKnown RBP11.03□□□□□ -0.64
VTI1A-209ENST00000496445 MRPS15P82914 257 aaKnown RBP11.03□□□□□ -0.64
VTI1A-209ENST00000496445 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
VTI1A-209ENST00000496445 AKIRIN2Q53H80 203 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 ACTBL2Q562R1 376 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 LFNGQ8NES3 379 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 DCUN1D4Q92564 292 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 ARPC1AQ92747 370 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
VTI1A-209ENST00000496445 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
VTI1A-209ENST00000496445 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
VTI1A-209ENST00000496445 CSMD3Q7Z407 3707 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 LINC01619G3V211 115 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 OVOL1O14753 267 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 MRPS14O60783 128 aaKnown RBP11.02□□□□□ -0.65
VTI1A-209ENST00000496445 IGHV3-11P01762 117 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 CRYGBP07316 175 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 GADD45AP24522 165 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 TMEM267Q0VDI3 215 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-209ENST00000496445 PYHIN1Q6K0P9 492 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 SPARTQ8N0X7 666 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 OR10J5Q8NHC4 309 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 FLYWCH2Q96CP2 140 aaKnown RBP11.02□□□□□ -0.65
VTI1A-209ENST00000496445 MS4A10Q96PG2 267 aa11.02□□□□□ -0.65
VTI1A-209ENST00000496445 TXNL4BQ9NX01 149 aaKnown RBP11.02□□□□□ -0.65
VTI1A-209ENST00000496445 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-209ENST00000496445 SORL1Q92673 2214 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 INSL3P51460 131 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 TPPP2P59282 170 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 PJVKQ0ZLH3 352 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 MRGPRG-AS1Q2M3A8 158 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 Q6ZS49 121 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 GRPEL2Q8TAA5 225 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 STARD9Q9P2P6 4700 aa11.01□□□□□ -0.65
VTI1A-209ENST00000496445 METTL21EPA6NDL7 271 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 SRRM4A7MD48 611 aaKnown RBP11□□□□□ -0.65
VTI1A-209ENST00000496445 PSMB9P28065 219 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 FGF9P31371 208 aaPredicted RBP11□□□□□ -0.65
VTI1A-209ENST00000496445 ARFRP1Q13795 201 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 FXYD3Q14802 87 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 SRSF7Q16629 238 aaKnown RBP eCLIP11□□□□□ -0.65
VTI1A-209ENST00000496445 TMEM177Q53S58 311 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 ZNF429Q86V71 674 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 H1FOOQ8IZA3 346 aaPredicted RBP11□□□□□ -0.65
VTI1A-209ENST00000496445 DDB2Q92466 427 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 RHOVQ96L33 236 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 HARBI1Q96MB7 349 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 ATG5Q9H1Y0 275 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11□□□□□ -0.65
VTI1A-209ENST00000496445 STUB1Q9UNE7 303 aa11□□□□□ -0.65
VTI1A-209ENST00000496445 TNCP24821 2201 aa10.99□□□□□ -0.65
VTI1A-209ENST00000496445 LINC00473A8K010 186 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms