RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 KLK15Q9H2R5 256 aa11.32□□□□□ -0.6
PDAP1-204ENST00000496335 VCX3AQ9NNX9 186 aa11.32□□□□□ -0.6
PDAP1-204ENST00000496335 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
PDAP1-204ENST00000496335 ETV7Q9Y603 341 aa11.32□□□□□ -0.6
PDAP1-204ENST00000496335 DNAH3Q8TD57 4116 aa11.32□□□□□ -0.6
PDAP1-204ENST00000496335 TRAV41A0A0B4J266 112 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 APOA2P02652 100 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 OR5H8P0DN80 308 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 PSMB8P28062 276 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
PDAP1-204ENST00000496335 MYCNOSP40205 109 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
PDAP1-204ENST00000496335 SCAND1P57086 179 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 PITPNAQ00169 270 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 P2RX4Q99571 388 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 METTL1Q9UBP6 276 aaKnown RBP11.31□□□□□ -0.6
PDAP1-204ENST00000496335 A3GALT2U3KPV4 340 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 TNCP24821 2201 aa11.31□□□□□ -0.6
PDAP1-204ENST00000496335 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 SLC25A17O43808 307 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 EGR2P11161 476 aaPredicted RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 PTHLHP12272 177 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 NFYAP23511 347 aaPredicted RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 SLC6A1P30531 599 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 ZNF660Q6AZW8 331 aaPredicted RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 MINDY2Q8NBR6 621 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 ABHD5Q8WTS1 349 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 FAM103A1Q9BTL3 118 aaKnown RBP11.3□□□□□ -0.6
PDAP1-204ENST00000496335 SPATA2Q9UM82 520 aa11.3□□□□□ -0.6
PDAP1-204ENST00000496335 CCL24O00175 119 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 CA2P00918 260 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 IGLV1-40P01703 118 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 FCER2P06734 321 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 RAB25P57735 213 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 KIAA0141Q14154 515 aaPredicted RBP11.29□□□□□ -0.6
PDAP1-204ENST00000496335 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 GVQW1Q8N7I0 195 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 BVESQ8NE79 360 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 CASTOR1Q8WTX7 329 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 NECAP2Q9NVZ3 263 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 ANXA10Q9UJ72 324 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 NUBP2Q9Y5Y2 271 aa11.29□□□□□ -0.6
PDAP1-204ENST00000496335 LINC00473A8K010 186 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 SOX15O60248 233 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 SPDEFO95238 335 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 IGLV2-23P01705 113 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 CTXN2P0C2S0 81 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
PDAP1-204ENST00000496335 LUMP51884 338 aaPredicted RBP11.28□□□□□ -0.6
PDAP1-204ENST00000496335 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 OR5B12Q96R08 314 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 FUNDC2Q9BWH2 189 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 AUNIPQ9H7T9 357 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 DIABLOQ9NR28 239 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
PDAP1-204ENST00000496335 OR2W1Q9Y3N9 320 aa11.28□□□□□ -0.6
PDAP1-204ENST00000496335 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 IGKV1D-13A0A0B4J2D9 117 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 A0A1W2PN81 502 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 A6NJ64 397 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 SRRM4A7MD48 611 aaKnown RBP11.27□□□□□ -0.61
PDAP1-204ENST00000496335 ARPC1BO15143 372 aaKnown RBP11.27□□□□□ -0.61
PDAP1-204ENST00000496335 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.61
PDAP1-204ENST00000496335 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 IGKV1-13P0DP09 117 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
PDAP1-204ENST00000496335 CHRNA7P36544 502 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 RAB9AP51151 201 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 CRIP2P52943 208 aaPredicted RBP11.27□□□□□ -0.61
PDAP1-204ENST00000496335 NCS1P62166 190 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 TMEM177Q53S58 311 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 UNQ5815/PRO19632Q6UWF5 114 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 ZNF645Q8N7E2 425 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 LFNGQ8NES3 379 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 BEST4Q8NFU0 473 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 DDB2Q92466 427 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
PDAP1-204ENST00000496335 SHOXO15266 292 aa11.26□□□□□ -0.61
PDAP1-204ENST00000496335 TMEM127O75204 238 aa11.26□□□□□ -0.61
PDAP1-204ENST00000496335 CRYGBP07316 175 aa11.26□□□□□ -0.61
PDAP1-204ENST00000496335 LGALS7P47929 136 aa11.26□□□□□ -0.61
PDAP1-204ENST00000496335 KRTAP10-11P60412 298 aa11.26□□□□□ -0.61
PDAP1-204ENST00000496335 VBP1P61758 197 aa11.26□□□□□ -0.61
PDAP1-204ENST00000496335 GNB1P62873 340 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms