RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 PLGLAQ15195 96 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 NDUFA11Q86Y39 141 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 Q8N9W7 124 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 TCRBV4S1A1TA0A5B7 111 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 GABARAPH6UMI1 98 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 M0R1X1 148 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 CT45A6P0DMU7 189 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 CT45A5P0DMU8 189 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 CT45A7P0DMV0 189 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 FCGR2CP31995 323 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 TNFSF8P32971 234 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 ACTBL2Q562R1 376 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 OR4F17Q8NGA8 305 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 FAM110DQ8TAY7 271 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-209ENST00000496189 OR4F4Q96R69 305 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 ABHD1Q96SE0 405 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 EHFQ9NZC4 300 aa12.98□□□□□ -0.33
SF3A1-209ENST00000496189 F2RL1P55085 397 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 HERV-K104P61576 105 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 TAGLNQ01995 201 aaKnown RBP12.97□□□□□ -0.33
SF3A1-209ENST00000496189 SSBP1Q04837 148 aaKnown RBP12.97□□□□□ -0.33
SF3A1-209ENST00000496189 GLDNQ6ZMI3 551 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-209ENST00000496189 PDPNQ86YL7 162 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 FAM71E2Q8N5Q1 922 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 COMMD1Q8N668 190 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 OR52I2Q8NH67 350 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 GIMAP1Q8WWP7 306 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 RNF5Q99942 180 aa12.97□□□□□ -0.33
SF3A1-209ENST00000496189 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-209ENST00000496189 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-209ENST00000496189 TSSC4Q9Y5U2 329 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-209ENST00000496189 H0YJW9 148 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 J3QRK9 145 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 CTDSPLO15194 276 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 TUSC2O75896 110 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 PMP2P02689 132 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 TBPP20226 339 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 VDAC1P21796 283 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 HLA-DMAP28067 261 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 DYRK1AQ13627 763 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
SF3A1-209ENST00000496189 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 STPG2Q8N412 459 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 ZNF645Q8N7E2 425 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 DRAXINQ8NBI3 349 aaPredicted RBP12.96□□□□□ -0.33
SF3A1-209ENST00000496189 OR5AN1Q8NGI8 311 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 OR6F1Q8NGZ6 308 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 BORCS5Q969J3 196 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 R3HDM4Q96D70 268 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 ADTRPQ96IZ2 230 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 TSNAXQ99598 290 aaKnown RBP12.96□□□□□ -0.33
SF3A1-209ENST00000496189 PLSCR3Q9NRY6 295 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 SDHAF2Q9NX18 166 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 MTFP1Q9UDX5 166 aa12.96□□□□□ -0.33
SF3A1-209ENST00000496189 TSPAN15O95858 294 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 PPYP01298 95 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 IFNA6P05013 189 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 RRASP10301 218 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 PF4V1P10720 104 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 AADACP22760 399 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 HRH1P35367 487 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 RFX2P48378 723 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 THBS3P49746 956 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 TSPAN5P62079 268 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 RPS16P62249 146 aaKnown RBP12.95□□□□□ -0.34
SF3A1-209ENST00000496189 RTL8BQ17RB0 113 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 C5orf64Q2M2E5 130 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 LIN54Q6MZP7 749 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 DHRS11Q6UWP2 260 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 TMEM17Q86X19 198 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 NPBQ8NG41 125 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-209ENST00000496189 SMIM4Q8WVI0 70 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 FLYWCH2Q96CP2 140 aaKnown RBP12.95□□□□□ -0.34
SF3A1-209ENST00000496189 NOL4LQ96MY1 436 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-209ENST00000496189 BATF3Q9NR55 127 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 SLC35D1Q9NTN3 355 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 TAS2R8Q9NYW2 309 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 KLK11Q9UBX7 282 aa12.95□□□□□ -0.34
SF3A1-209ENST00000496189 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 HLA-DRB1P01911 266 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 CD83Q01151 205 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 MSMO1Q15800 293 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 SPANXN2Q5MJ10 180 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 TEX38Q6PEX7 206 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 SECTM1Q8WVN6 248 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 LINC00527Q9UJ94 153 aa12.94□□□□□ -0.34
SF3A1-209ENST00000496189 RRHO14718 337 aa12.93□□□□□ -0.34
SF3A1-209ENST00000496189 NDUFA3O95167 84 aa12.93□□□□□ -0.34
SF3A1-209ENST00000496189 SPDEFO95238 335 aa12.93□□□□□ -0.34
SF3A1-209ENST00000496189 PTBP1P26599 531 aaKnown RBP eCLIP12.93□□□□□ -0.34
SF3A1-209ENST00000496189 TAS2R19P59542 299 aa12.93□□□□□ -0.34
SF3A1-209ENST00000496189 FXYD4P59646 89 aa12.93□□□□□ -0.34
SF3A1-209ENST00000496189 DGCR2P98153 550 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms