RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 TMEM65Q6PI78 240 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 BTNL3Q6UXE8 466 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 LINC00311Q8N616 119 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 THAP6Q8TBB0 222 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 ZNF596Q8TC21 504 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 CD300LFQ8TDQ1 290 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 TCTEX1D2Q8WW35 142 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 LEAP2Q969E1 77 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 LSM10Q969L4 123 aaKnown RBP8.79□□□□□ -1
ECHDC3-204ENST00000495787 SSBP3Q9BWW4 388 aaPredicted RBP8.79□□□□□ -1
ECHDC3-204ENST00000495787 BARX1Q9HBU1 254 aaPredicted RBP8.79□□□□□ -1
ECHDC3-204ENST00000495787 GSKIPQ9P0R6 139 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 HSPB11Q9Y547 144 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 SESN1Q9Y6P5 492 aa8.79□□□□□ -1
ECHDC3-204ENST00000495787 MALRD1Q5VYJ5 2156 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 FBN1P35555 2871 aaKnown RBP8.78□□□□□ -1
ECHDC3-204ENST00000495787 hCG_1809904A0A1W2PP81 198 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 A0A1W2PPE2 198 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 A0A1W2PPE3 182 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 A0A1W2PR64 198 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 A0A1W2PRV1 198 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 LINC00473A8K010 186 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 M0R1X1 148 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 ATG12O94817 140 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 IGKV1-39P01597 117 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 IGHV2-5P01817 119 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 IGKV1D-39P04432 117 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 LIPFP07098 398 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 PET100P0DJ07 73 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 SLC25A6P12236 298 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 LYL1P12980 280 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 KIR2DS2P43631 304 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 GNG10P50151 68 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 ERVFRD-1P60508 538 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 RAB32Q13637 225 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 LRRC37A5PQ49AS3 106 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 RPL39P5Q59GN2 51 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 NMSQ5H8A3 153 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 THOC7Q6I9Y2 204 aaKnown RBP8.78□□□□□ -1
ECHDC3-204ENST00000495787 ODF3L1Q8IXM7 274 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 SPAG16Q8N0X2 631 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 LYG1Q8N1E2 194 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 C11orf42Q8N5U0 333 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 ZNF525Q8N782 197 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 ADTRPQ96IZ2 230 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 S1PR3Q99500 378 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 NARFLQ9H6Q4 476 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 PLSCR3Q9NRY6 295 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 ZFP57Q9NU63 452 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
ECHDC3-204ENST00000495787 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 LOC105371242A0A075B767 164 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 SAA2-SAA4A0A096LPE2 208 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 A0A1B0GU03 582 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 C22orf46C9J442 243 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 J3QR06 171 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 L7N2F9 121 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 NDUFS8O00217 210 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 ARPC5O15511 151 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 RBFOX2O43251 390 aaKnown RBP eCLIP8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 SAA2P0DJI9 122 aaPredicted RBP8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 PAX1P15863 534 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 CXCL2P19875 107 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 C4BPBP20851 252 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 THBS3P49746 956 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 BRWD1-AS2P59051 145 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 PRSS54Q6PEW0 395 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 ZNF546Q86UE3 836 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 OR4D5Q8NGN0 318 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 OR9G1Q8NH87 305 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 RNASE11Q8TAA1 199 aaKnown RBP8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 GPR146Q96CH1 333 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 ZNF251Q9BRH9 671 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 RNF126Q9BV68 326 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 TMEM133Q9H2Q1 129 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 MBD2Q9UBB5 411 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 TNFSF18Q9UNG2 199 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 PRELID3BQ9Y3B1 194 aa8.77□□□□□ -1.01
ECHDC3-204ENST00000495787 A8MXK9 166 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 H0YIZ8 118 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 M0R1W7 72 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 OR2F2O95006 317 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 IGKV1-5P01602 117 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 MBPP02686 304 aaPredicted RBP8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 RLN2P04090 185 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 AKR1C2P52895 323 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 ATP5J2P56134 94 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 S100A10P60903 97 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 ZNF816Q0VGE8 651 aaPredicted RBP8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 OR2F1Q13607 317 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 SMCO1Q147U7 214 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 OR2B11Q5JQS5 317 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 Q5PR19 223 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 FAM71F2Q6NXP2 309 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 C1orf229Q6ZS94 237 aaPredicted RBP8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 ZNF833PQ6ZTB9 187 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 FAM219AQ8IW50 185 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 ABHD12Q8N2K0 398 aa8.76□□□□□ -1.01
ECHDC3-204ENST00000495787 CLDND2Q8NHS1 167 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms