RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IGKV1D-8A0A087WSZ0 117 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 TRIM64CA6NLI5 447 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 IGKV1-16P04430 117 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 RPS19P39019 145 aaKnown RBP13.84□□□□□ -0.19
HDAC4-211ENST00000494800 MYCNOSP40205 109 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 CDX1P47902 265 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-211ENST00000494800 LUMP51884 338 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-211ENST00000494800 CFHR3Q02985 330 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 PSG5Q15238 335 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 BEAN1Q3B7T3 259 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 OXLD1Q5BKU9 147 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 UBE2NLQ5JXB2 153 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 C8orf86Q6ZUL3 223 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 GPR61Q9BZJ8 451 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 OR2W1Q9Y3N9 320 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 WSB1Q9Y6I7 421 aa13.84□□□□□ -0.19
HDAC4-211ENST00000494800 SSX5O60225 188 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 TGFBR1P36897 503 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 CBX5P45973 191 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 LGALS7P47929 136 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 CX3CL1P78423 397 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 KPRPQ5T749 579 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-211ENST00000494800 REC114Q7Z4M0 266 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 ZNF645Q8N7E2 425 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 KCTD12Q96CX2 325 aaKnown RBP13.83□□□□□ -0.2
HDAC4-211ENST00000494800 FUNDC2Q9BWH2 189 aa13.83□□□□□ -0.2
HDAC4-211ENST00000494800 XRCC3O43542 346 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 IGLL1P15814 213 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-211ENST00000494800 PSMB8P28062 276 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 CD40LGP29965 261 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 ZNF562Q6V9R5 426 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 SAMD12Q8N8I0 201 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 BEST4Q8NFU0 473 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 OR13F1Q8NGS4 319 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 SLC25A46Q96AG3 418 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 HARBI1Q96MB7 349 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 CLCC1Q96S66 551 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 MCRIP2Q9BUT9 160 aaKnown RBP13.82□□□□□ -0.2
HDAC4-211ENST00000494800 AUNIPQ9H7T9 357 aa13.82□□□□□ -0.2
HDAC4-211ENST00000494800 G3V318 75 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 J3QRK9 145 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 SHOXO15266 292 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 SLC25A17O43808 307 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 HLA-DQB1P01920 261 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 PPIFP30405 207 aaKnown RBP13.81□□□□□ -0.2
HDAC4-211ENST00000494800 LINC00205P59089 165 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 TMEM69Q5SWH9 247 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 HOGA1Q86XE5 327 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 MRPL41Q8IXM3 137 aaKnown RBP13.81□□□□□ -0.2
HDAC4-211ENST00000494800 BVESQ8NE79 360 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 DPF1Q92782 380 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 IFT46Q9NQC8 304 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 NECAP2Q9NVZ3 263 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 FOXA2Q9Y261 457 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-211ENST00000494800 PRELID3BQ9Y3B1 194 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
HDAC4-211ENST00000494800 CCL24O00175 119 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 FCN1O00602 326 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 CNIH1O95406 144 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 CA2P00918 260 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 DUTP33316 252 aaKnown RBP13.8□□□□□ -0.2
HDAC4-211ENST00000494800 CRIP2P52943 208 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-211ENST00000494800 PYHIN1Q6K0P9 492 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 ETV3LQ6ZN32 361 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 LCNL1Q6ZST4 164 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 C18orf65Q6ZTR6 163 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 MINDY2Q8NBR6 621 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 C4orf3Q8WVX3 66 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 UBE2E2Q96LR5 201 aa13.8□□□□□ -0.2
HDAC4-211ENST00000494800 MRPS7Q9Y2R9 242 aaKnown RBP13.8□□□□□ -0.2
HDAC4-211ENST00000494800 SMIM31A0A1B0GVY4 71 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 A0A1W2PN81 502 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 TUSC2O75896 110 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 IGLV1-40P01703 118 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 CHRNA7P36544 502 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 RAB25P57735 213 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 VBP1P61758 197 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 NCS1P62166 190 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 VMA21Q3ZAQ7 101 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 AKIRIN2Q53H80 203 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 TMEM177Q53S58 311 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 ACTBL2Q562R1 376 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 KCTD9Q7L273 389 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 ACOT12Q8WYK0 555 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 ARPC1AQ92747 370 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 P2RX4Q99571 388 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 VSIG4Q9Y279 399 aa13.79□□□□□ -0.2
HDAC4-211ENST00000494800 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
HDAC4-211ENST00000494800 CREBL2O60519 120 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-211ENST00000494800 RAB9AP51151 201 aa13.78□□□□□ -0.2
HDAC4-211ENST00000494800 GNB1P62873 340 aa13.78□□□□□ -0.2
HDAC4-211ENST00000494800 NDPQ00604 133 aa13.78□□□□□ -0.2
HDAC4-211ENST00000494800 FXYD3Q14802 87 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms