RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 NCR3LG1Q68D85 454 aa9.34□□□□□ -0.91
CHMP3-209ENST00000494623 ZNF343Q6P1L6 599 aa9.34□□□□□ -0.91
CHMP3-209ENST00000494623 ZNRF1Q8ND25 227 aa9.34□□□□□ -0.91
CHMP3-209ENST00000494623 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
CHMP3-209ENST00000494623 FAM234AQ9H0X4 552 aa9.34□□□□□ -0.91
CHMP3-209ENST00000494623 DOCK11Q5JSL3 2073 aa9.34□□□□□ -0.91
CHMP3-209ENST00000494623 CADP27708 2225 aa9.34□□□□□ -0.91
CHMP3-209ENST00000494623 CHD3Q12873 2000 aaKnown RBP9.34□□□□□ -0.91
CHMP3-209ENST00000494623 C5orf52A6NGY3 159 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 RAB29O14966 203 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 ZNF737O75373 536 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 CEACAM4O75871 244 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 BCL2P10415 239 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 RPS10P46783 165 aaKnown RBP9.33□□□□□ -0.92
CHMP3-209ENST00000494623 GPR12P47775 334 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 ZNF66Q6ZN08 573 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 MOGAT3Q86VF5 341 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 MUCL1Q96DR8 90 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 OR2V2Q96R30 315 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
CHMP3-209ENST00000494623 AGMATQ9BSE5 352 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 SLC39A9Q9NUM3 307 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 CISD1Q9NZ45 108 aaKnown RBP9.33□□□□□ -0.92
CHMP3-209ENST00000494623 MAP1LC3B2A6NCE7 125 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 ADH4P08319 380 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 EDDM3BP56851 147 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 SSX9Q7RTT3 188 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 OR10P1Q8NGE3 313 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 LHX4Q969G2 390 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 PINX1Q96BK5 328 aaKnown RBP9.33□□□□□ -0.92
CHMP3-209ENST00000494623 MAP1LC3BQ9GZQ8 125 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 SRRM5B3KS81 715 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 FCGR3BO75015 233 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 IGKV1D-33P01593 117 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 IGKV1-33P01594 117 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 CRYAAP02489 173 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 GZMHP20718 246 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 HTD2P86397 168 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 TLE1Q04724 770 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 C1orf174Q8IYL3 243 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 RPP25LQ8N5L8 163 aaKnown RBP9.33□□□□□ -0.92
CHMP3-209ENST00000494623 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 FAM215AQ9Y5M1 114 aa9.33□□□□□ -0.92
CHMP3-209ENST00000494623 CACNA1GO43497 2377 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 MARCH11A6NNE9 402 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 PROP1O75360 226 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 NQO2P16083 231 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 FGF7P21781 194 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 MEOX2P50222 304 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 MORN2Q502X0 79 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 ACSM6Q6P461 480 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 HEPN1Q6WQI6 88 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 R3HDM4Q96D70 268 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 QTRT1Q9BXR0 403 aaKnown RBP9.32□□□□□ -0.92
CHMP3-209ENST00000494623 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
CHMP3-209ENST00000494623 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 K7EM74 188 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 IFNA17P01571 189 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 FAM90A2PQ658T7 463 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 RBMS3Q6XE24 437 aaKnown RBP9.32□□□□□ -0.92
CHMP3-209ENST00000494623 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 TCTEX1D1Q8N7M0 179 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 EDARADDQ8WWZ3 215 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 SNX22Q96L94 193 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 TMEM147Q9BVK8 224 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
CHMP3-209ENST00000494623 ICE1Q9Y2F5 2266 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 A0A1B0GWJ7 208 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 M0R1X1 148 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 MGST3O14880 152 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 CXCL1P09341 107 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 OR9G9P0C7N8 305 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 DUTP33316 252 aaKnown RBP9.31□□□□□ -0.92
CHMP3-209ENST00000494623 ZNF134P52741 427 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 KLF3P57682 345 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-209ENST00000494623 TFF3Q07654 80 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 RPL39P5Q59GN2 51 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 TIMM23BQ5SRD1 257 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 TRAT1Q6PIZ9 186 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 MRGPRGQ86SM5 289 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 VKORC1L1Q8N0U8 176 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 FAM169BQ8N8A8 192 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 PPP1R35Q8TAP8 253 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 Q8WTZ3 238 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 CA5BP1Q8WTZ4 195 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 ITLN1Q8WWA0 313 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 LEAP2Q969E1 77 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 MALSU1Q96EH3 234 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 MEGF10Q96KG7 1140 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 LAMP3Q9UQV4 416 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 RP1L1Q8IWN7 2480 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-209ENST00000494623 A0A087WWC5 75 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 TGIF2-C20orf24A0A0A6YYL0 155 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 MAS1LP35410 378 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 ELOBQ15370 118 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms