RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NDUFB7P17568 137 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 OMGP23515 440 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 SSTR2P30874 369 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 KIR2DS2P43631 304 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 LPAR6P43657 344 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 P2RY1P47900 373 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 PAX9P55771 341 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 TAS2R30P59541 319 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 TAGLNQ01995 201 aaKnown RBP5.55□□□□□ -1.52
MSH5-217ENST00000494458 ZNF295-AS1Q8N0V1 137 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 OR5AN1Q8NGI8 311 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 OR51H1Q8NH63 302 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 RAB39BQ96DA2 213 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 NEIL1Q96FI4 390 aaPredicted RBP5.55□□□□□ -1.52
MSH5-217ENST00000494458 ADTRPQ96IZ2 230 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 ARV1Q9H2C2 271 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 ITGB1BP2Q9UKP3 347 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 PAIP2BQ9ULR5 123 aaKnown RBP5.55□□□□□ -1.52
MSH5-217ENST00000494458 NSG2Q9Y328 171 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 AUP1Q9Y679 476 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 MALRD1Q5VYJ5 2156 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 SAA2-SAA4A0A096LPE2 208 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 RPS10-NUDT3A0A1W2PQS6 291 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 MSGN1A6NI15 193 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 VWC2LB2RUY7 222 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 LY6LH3BQJ8 138 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 M0R1W7 72 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 ATG12O94817 140 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 TMEM50AO95807 157 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 RLN2P04090 185 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 GAPDHP04406 335 aaKnown RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 SAA2P0DJI9 122 aaPredicted RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 CT45A6P0DMU7 189 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 CT45A5P0DMU8 189 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 CT45A7P0DMV0 189 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 CCL3L1P16619 93 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 ZNF16P17020 682 aaPredicted RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 NKX2-1P43699 371 aaPredicted RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 GPR12P47775 334 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 THBS3P49746 956 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 LINC00205P59089 165 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 LMO4P61968 165 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 SMCO1Q147U7 214 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 NDUFA5Q16718 116 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 LRRC37A5PQ49AS3 106 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 CXorf66Q5JRM2 361 aaPredicted RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 PRAMEF5Q5TYX0 476 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 SPAG16Q8N0X2 631 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 STPG2Q8N412 459 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 ZNF383Q8NA42 475 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 INO80EQ8NBZ0 244 aaPredicted RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 BEND2Q8NDZ0 799 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 OR52E5Q8NH55 327 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 OR9G1Q8NH87 305 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 TMEM186Q96B77 213 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 PHYHIPLQ96FC7 376 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 TIMD4Q96H15 378 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 SMIM8Q96KF7 97 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 PCGF1Q9BSM1 259 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 ARL6Q9H0F7 186 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 TMEM133Q9H2Q1 129 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 GSKIPQ9P0R6 139 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 HSPB7Q9UBY9 170 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 CACFD1Q9UGQ2 172 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 RBM7Q9Y580 266 aaKnown RBP5.54□□□□□ -1.52
MSH5-217ENST00000494458 SESN1Q9Y6P5 492 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 LRBAP50851 2863 aa5.54□□□□□ -1.52
MSH5-217ENST00000494458 COL12A1Q99715 3063 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 A0A1W2PPH5 198 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 MEX3AA1L020 520 aaKnown RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 LINC00862A6NCI5 91 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 C22orf46C9J442 243 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 GPR137BO60478 399 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 NDUFS7O75251 213 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 LY6HO94772 140 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 LY86O95711 162 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 IFNA7P01567 189 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 IGHV2-5P01817 119 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 RPL12P30050 165 aaKnown RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 CDKN1AP38936 164 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 ERVFRD-1P60508 538 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 EXOSC2Q13868 293 aaKnown RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 HABP2Q14520 560 aaPredicted RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 TMEM177Q53S58 311 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 RPL39P5Q59GN2 51 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 CLLU1Q5K131 121 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 DHRS7BQ6IAN0 325 aaPredicted RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 ZNF429Q86V71 674 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 FOXRED2Q8IWF2 684 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 PUSL1Q8N0Z8 303 aaKnown RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 KIR3DL3Q8N743 410 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 Q8N7P7 452 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 UBAC2Q8NBM4 344 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 OR11H6Q8NGC7 330 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 OR8B3Q8NGG8 313 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 DCUN1D4Q92564 292 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 OR8B2Q96RD0 313 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 RAB40CQ96S21 281 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 S1PR3Q99500 378 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 ARPC5LQ9BPX5 153 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms