RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 CMTM3Q96MX0 182 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 S1PR3Q99500 378 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 HSPB9Q9BQS6 159 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 ST6GALNAC5Q9BVH7 336 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 DIABLOQ9NR28 239 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 SDHAF2Q9NX18 166 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 RNF150Q9ULK6 438 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 PLXNB1O43157 2135 aa6.92□□□□□ -1.3
ITGB1-217ENST00000494395 VWFP04275 2813 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 TUSC2O75896 110 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 APOA1P02647 267 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 CTXN2P0C2S0 81 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 OR8U9P0C7N5 309 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
ITGB1-217ENST00000494395 RORCP51449 518 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 TAS2R20P59543 309 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 ACTBP60709 375 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 CD83Q01151 205 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 SPCS2Q15005 226 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 C11orf44Q8N8P7 122 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 BEST4Q8NFU0 473 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 OR8U1Q8NH10 309 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 ACOT12Q8WYK0 555 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 PHF21AQ96BD5 680 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 S100A16Q96FQ6 103 aaKnown RBP6.91□□□□□ -1.3
ITGB1-217ENST00000494395 BCL7BQ9BQE9 202 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 OR2D2Q9H210 308 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 ANXA10Q9UJ72 324 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 ZNF221Q9UK13 617 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 PKD1L1Q8TDX9 2849 aa6.91□□□□□ -1.3
ITGB1-217ENST00000494395 IGKV1D-13A0A0B4J2D9 117 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 NCBP2LA6PVI3 153 aaKnown RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 M0QZ24 198 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 NBR2O15453 112 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 HPGDSO60760 199 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 IGLV2-14P01704 120 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 IGKV1-16P04430 117 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 IGKV1-13P0DP09 117 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 ELK1P19419 428 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 NFYAP23511 347 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 MC5RP33032 325 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 CBX5P45973 191 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 GPR12P47775 334 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 TMBIM6P55061 237 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 EIF4EBP1Q13541 118 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 MMDQ15546 238 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 C5orf64Q2M2E5 130 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 C9orf152Q5JTZ5 239 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 TMEM69Q5SWH9 247 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 ETV3LQ6ZN32 361 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 SLC35E3Q7Z769 313 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 CLVS1Q8IUQ0 354 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 DRAXINQ8NBI3 349 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 OR5AU1Q8NGC0 362 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 DYNC2LI1Q8TCX1 351 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 RAB2BQ8WUD1 216 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 DDB2Q92466 427 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 NOL4LQ96MY1 436 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 GINS4Q9BRT9 223 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 COMMD3Q9UBI1 195 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 ZNF107Q9UII5 783 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-217ENST00000494395 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 WASHC3Q9Y3C0 194 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 OR2W1Q9Y3N9 320 aa6.9□□□□□ -1.3
ITGB1-217ENST00000494395 IGHV7-81A0A0B4J1V7 117 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 MEIS3P1A6NDR6 274 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 LINC00473A8K010 186 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 M0R1X1 148 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 RBBP9O75884 186 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 HLA-DRB1P01911 266 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 DUTP33316 252 aaKnown RBP6.89□□□□□ -1.31
ITGB1-217ENST00000494395 CRIP2P52943 208 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-217ENST00000494395 CFHR3Q02985 330 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 C2orf68Q2NKX9 166 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 TEPPQ6URK8 271 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 PDPNQ86YL7 162 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 STPG2Q8N412 459 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 OR5AP2Q8NGF4 316 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 GPX8Q8TED1 209 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 CHPT1Q8WUD6 406 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 RNF5Q99942 180 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 RASL11BQ9BPW5 248 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 MIXL1Q9H2W2 232 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 LINC00527Q9UJ94 153 aa6.89□□□□□ -1.31
ITGB1-217ENST00000494395 PSMB11A5LHX3 300 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 H3BMQ9 156 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 AP4M1O00189 453 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 RRHO14718 337 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 KCNAB3O43448 404 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 PEX14O75381 377 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 IGLV2-23P01705 113 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 IGF1P05019 195 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 CSF1P09603 554 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 SOX6P35712 828 aa6.88□□□□□ -1.31
ITGB1-217ENST00000494395 LUMP51884 338 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms