RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 DPRXA6NFQ7 191 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 C3orf79P0CE67 100 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 GABRG2P18507 467 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 COL8A2P25067 703 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 CLDN15P56746 228 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 LCN12Q6JVE5 192 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 GSX1Q9H4S2 264 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-210ENST00000493582 SCO2A0A1W2PP80 73 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 A0A1W2PS18 150 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 NTF4P34130 210 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 ZNF83P51522 516 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 GFRA1P56159 465 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 SLC35B1P78383 322 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 PSG7Q13046 419 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 ZIC4Q8N9L1 334 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 ST6GALNAC3Q8NDV1 305 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 ZNF488Q96MN9 340 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 EML6Q6ZMW3 1958 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 A0A1B0GX78 115 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 TNFSF11O14788 317 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 OR1D5P58170 312 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 VAMP3Q15836 100 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 LDLRAD2Q5SZI1 272 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 DEFB119Q8N690 84 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 OR10P1Q8NGE3 313 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 OR5A2Q8NGI9 324 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 STRADBQ9C0K7 418 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 FGF23Q9GZV9 251 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-210ENST00000493582 IL36BQ9NZH7 164 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 COL5A1P20908 1838 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-210ENST00000493582 FRYQ5TBA9 3013 aa9.86□□□□□ -0.83
HDAC4-210ENST00000493582 LOC102724200A0A096LPH7 203 aaPredicted RBP9.85□□□□□ -0.83
HDAC4-210ENST00000493582 K7EN84 100 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 EDDM3BP56851 147 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 FGF12P61328 243 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 TGFBR3Q03167 851 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 SRSF7Q16629 238 aaKnown RBP eCLIP9.85□□□□□ -0.833e-10■■■■■ 33.8
HDAC4-210ENST00000493582 ANKRD37Q7Z713 158 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 FAM122AQ96E09 287 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 IL23AQ9NPF7 189 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 EXPH5Q8NEV8 1989 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 KIAA0100Q14667 2235 aaKnown RBP9.85□□□□□ -0.83
HDAC4-210ENST00000493582 USF3Q68DE3 2245 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 LILRA5A6NI73 299 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 ZG16O60844 167 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 NTF3P20783 257 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 TRIM61Q5EBN2 209 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 MRGPRDQ8TDS7 321 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 ZNF296Q8WUU4 475 aaPredicted RBP9.85□□□□□ -0.83
HDAC4-210ENST00000493582 UHRF2Q96PU4 802 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 KCNIP2Q9NS61 270 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 SLC35D1Q9NTN3 355 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 PMS2P5A8MQ11 134 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 ZXDAP98168 799 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 OR8I2Q8N0Y5 310 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
HDAC4-210ENST00000493582 A0A1W2PN81 502 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 RAMP3O60896 148 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 CCNOP22674 350 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 TNFSF4P23510 183 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 G6PCP35575 357 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 PRRX1P54821 245 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 LGALS4P56470 323 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 CFHR1Q03591 330 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 TCTEX1D1Q8N7M0 179 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 RNF138Q8WVD3 245 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 RLN3Q8WXF3 142 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 ZPBPQ9BS86 351 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 A0A1W2PPV4 95 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 G3V3Y1 287 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 DEGS1O15121 323 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 SYNGR1O43759 233 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 MYF5P13349 255 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 TRIP6Q15654 476 aaKnown RBP9.84□□□□□ -0.83
HDAC4-210ENST00000493582 MORN2Q502X0 79 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 NIT1Q86X76 327 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 MMD2Q8IY49 270 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 OR56B2PQ8NGI1 322 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 HSPB7Q9UBY9 170 aa9.84□□□□□ -0.83
HDAC4-210ENST00000493582 IGLV3-32A0A0A0MS00 114 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 PPBPP02775 128 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 HTD2P86397 168 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 RAET1LQ5VY80 246 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 Q8NFD4 153 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 NUDT10Q8NFP7 164 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 KCNE4Q8WWG9 221 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FGF21Q9NSA1 209 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 DEPPQ9NTK1 212 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 CACNA1DQ01668 2161 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A10PA6NDY2 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A18PA6NE21 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A16PA6NEW6 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A20PA6NIJ5 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A8PA6NJQ4 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A7PA6NKC0 464 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms