RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SMIM4Q8WVI0 70 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 MSI2Q96DH6 328 aaKnown RBP7.7□□□□□ -1.18
CSTF1-206ENST00000493039 FAM110AQ9BQ89 295 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 LINC00574Q9H8X3 128 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 MCUBQ9NWR8 336 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 TRAV25A0A0B4J276 109 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 PPIAL4CA0A0B4J2A2 164 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 IGKV1-6A0A0C4DH72 117 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 KIR2DS1A0A191URI9 304 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 C12orf77C9JDV5 145 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 ORC5O43913 435 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 LPLP06858 475 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 PPIAL4GP0DN37 164 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 IGHV4-31P0DP07 118 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 S100A7P31151 101 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 SSTR5P35346 364 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 GDNFP39905 211 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 DLX1P56177 255 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 MEF2CQ06413 473 aaPredicted RBP7.69□□□□□ -1.18
CSTF1-206ENST00000493039 KRTAP1-1Q07627 177 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 CLLU1Q5K131 121 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 GPR157Q5UAW9 335 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 OR52W1Q6IF63 320 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 BTNL3Q6UXE8 466 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 BAIAP2L2Q6UXY1 529 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 TRAPPC6BQ86SZ2 158 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 Q8N7P7 452 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 RFESDQ8TAC1 157 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 SETD6Q8TBK2 473 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 RNF125Q96EQ8 232 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 ST6GALNAC5Q9BVH7 336 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 MTFP1Q9UDX5 166 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 TRAPPC2LQ9UL33 140 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 LINC00312Q9Y6C7 94 aa7.69□□□□□ -1.18
CSTF1-206ENST00000493039 CBY3A6NI87 242 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 NPIPB11E5RHQ5 1161 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 TEX46H3BTG2 121 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 GABARAPH6UMI1 98 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 GSTZ1O43708 216 aaPredicted RBP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 SCGB2A1O75556 95 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 TNFRSF6BO95407 300 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 SCTP09683 121 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 OMGP23515 440 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 PITPNAQ00169 270 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 HERPUD1Q15011 391 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 DNLZQ5SXM8 178 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 Q6ZS49 121 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 HOGA1Q86XE5 327 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 Q8N402 240 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 LINC00052Q96N35 136 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 TAF9BQ9HBM6 251 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 IGHV2-70DA0A0C4DH43 119 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 KBTBD11-OT1A0A1B0GTJ5 212 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 hADV38S2A0JD32 116 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 B4DSR2 109 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 FOXH1O75593 365 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 MSMBP08118 114 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 ZNF728P0DKX0 622 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 ARL3P36405 182 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 GLP1RP43220 463 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 PRB3Q04118 309 aaPredicted RBP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 HMGN3Q15651 99 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 SRSF7Q16629 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 PYDC2Q56P42 97 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 ZNF782Q6ZMW2 699 aaPredicted RBP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 KCTD9Q7L273 389 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 RNF152Q8N8N0 203 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 OR1L1Q8NH94 360 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 GLYATL2Q8WU03 294 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 THAP7Q9BT49 309 aaPredicted RBP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 GFOD1Q9NXC2 390 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 OR6C3Q9NZP0 311 aa7.68□□□□□ -1.18
CSTF1-206ENST00000493039 SONP18583 2426 aaKnown RBP7.68□□□□□ -1.18
CSTF1-206ENST00000493039 TRGV10A0A0A0MS01 117 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 C17orf98A8MV24 154 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 GZMHP20718 246 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 S100A11P31949 105 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 LOXL3P58215 753 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 MRPS10P82664 201 aaKnown RBP7.67□□□□□ -1.18
CSTF1-206ENST00000493039 PAX8Q06710 450 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 RBMS2Q15434 407 aaKnown RBP7.67□□□□□ -1.18
CSTF1-206ENST00000493039 CD276Q5ZPR3 534 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 BEST4Q8NFU0 473 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 C15orf40Q8WUR7 153 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 FCAMRQ8WWV6 532 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 TMEM56Q96MV1 263 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 CALYQ9NYX4 217 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 UBE2J1Q9Y385 318 aaPredicted RBP7.67□□□□□ -1.18
CSTF1-206ENST00000493039 INSIG2Q9Y5U4 225 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 TMEM56-RWDD3S4R434 201 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 MTORP42345 2549 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 TRDCB7Z8K6 153 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 AVPP01185 164 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 HBZP02008 142 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 MMP9P14780 707 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 OR8G2PQ6IF36 304 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
CSTF1-206ENST00000493039 GDPD1Q8N9F7 314 aa7.67□□□□□ -1.18
CSTF1-206ENST00000493039 LINC01356Q8N9X3 169 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms