RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RAB19A4D1S5 217 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 TSPAN4O14817 238 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 MPPED1O15442 326 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 KCNAB3O43448 404 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 IFNA2P01563 188 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 IGLV2-14P01704 120 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 ERVFRD-1P60508 538 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 IL15RAQ13261 267 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 LEAP2Q969E1 77 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 MARC2Q969Z3 335 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 RRNAD1Q96FB5 475 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 GALNT14Q96FL9 552 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 ABHD14AQ9BUJ0 271 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 PRR13Q9NZ81 148 aa11.55□□□□□ -0.56
PDZRN3-210ENST00000492909 IGHV4-30-2A0A087WSY4 118 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 hCG_1809904A0A1W2PP81 198 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 A0A1W2PPE2 198 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 A0A1W2PR64 198 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 A0A1W2PRV1 198 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 KIAA1324LA8MWY0 1029 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 TNFSF12O43508 249 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 RBP4P02753 201 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 IGHV1-8P0DP01 117 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 ZNF134P52741 427 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 MSMO1Q15800 293 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 DEFB113Q30KQ7 82 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 Q3ZCU0 254 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 UTF1Q5T230 341 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 TBC1D26Q86UD7 250 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 BAP18Q8IXM2 172 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 C11orf42Q8N5U0 333 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 DRAM1Q8N682 238 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 AQP10Q96PS8 301 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 METTL8Q9H825 291 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 MPTX1A8MV57 137 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 APOC3P02656 99 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 OR5AC1P0C628 307 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 PET100P0DJ07 73 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 GPR12P47775 334 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 GNG10P50151 68 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 CLEC12BQ2HXU8 276 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 LRRC75A-AS1Q8N1F1 130 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 OR1S2Q8NGQ3 325 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 SUCNR1Q9BXA5 334 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
PDZRN3-210ENST00000492909 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 TRIM77I1YAP6 450 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 SLC31A2O15432 143 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 ENSAO43768 121 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 ATF4P18848 351 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 LCN2P80188 198 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 IFI27L2Q9H2X8 130 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 NAV2Q8IVL1 2488 aa11.53□□□□□ -0.56
PDZRN3-210ENST00000492909 A0A087X0M5 115 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 A0A1B0GX30 115 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 MSGN1A6NI15 193 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 NUDT19A8MXV4 375 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 FOXH1O75593 365 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 SLC25A16P16260 332 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 F2RP25116 425 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 RAB32Q13637 225 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 SP6Q3SY56 376 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 OR51H1Q8NH63 302 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 TP53RKQ96S44 253 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM133Q9H2Q1 129 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 AKAP9Q99996 3911 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 MED13LQ71F56 2210 aa11.52□□□□□ -0.57
PDZRN3-210ENST00000492909 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 M0R1W7 72 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 DNASE2O00115 360 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 HOXB5P09067 269 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 ARF6P62330 175 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM187Q14656 261 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 C8orf31Q8N9H6 132 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 GLYATL2Q8WU03 294 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 C5orf30Q96GV9 206 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 TEX15Q9BXT5 2789 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 WNK2Q9Y3S1 2297 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 H0Y980 276 aa11.51□□□□□ -0.57
PDZRN3-210ENST00000492909 RAB29O14966 203 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms