RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 SLC22A5O76082 557 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 RRASP10301 218 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 CD33P20138 364 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
PKP4-214ENST00000492496 CBX5P45973 191 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 LUMP51884 338 aaPredicted RBP12.5□□□□□ -0.41
PKP4-214ENST00000492496 LINC00205P59089 165 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 VBP1P61758 197 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 NCS1P62166 190 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 CBX3Q13185 183 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 KPRPQ5T749 579 aaPredicted RBP12.5□□□□□ -0.41
PKP4-214ENST00000492496 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 ANKRD13BQ86YJ7 626 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 C1QL4Q86Z23 238 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 C5orf30Q96GV9 206 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 MRPS26Q9BYN8 205 aaKnown RBP12.5□□□□□ -0.41
PKP4-214ENST00000492496 PARP11Q9NR21 331 aa12.5□□□□□ -0.41
PKP4-214ENST00000492496 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
PKP4-214ENST00000492496 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 WIPF1O43516 503 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
PKP4-214ENST00000492496 NFYAP23511 347 aaPredicted RBP12.49□□□□□ -0.41
PKP4-214ENST00000492496 PSMB8P28062 276 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 DUTP33316 252 aaKnown RBP12.49□□□□□ -0.41
PKP4-214ENST00000492496 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
PKP4-214ENST00000492496 LGALS7P47929 136 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 ARPC4P59998 168 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 CX3CL1P78423 397 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 ZNF695Q8IW36 515 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 ZNF645Q8N7E2 425 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 SAMD12Q8N8I0 201 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 KLHL30-AS1Q8NEE0 82 aa12.49□□□□□ -0.41
PKP4-214ENST00000492496 TUSC2O75896 110 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 GABARAPO95166 117 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 TMEM177Q53S58 311 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 GVQW1Q8N7I0 195 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 TCTEX1D1Q8N7M0 179 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 BVESQ8NE79 360 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 DDB2Q92466 427 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 WSB1Q9Y6I7 421 aa12.48□□□□□ -0.41
PKP4-214ENST00000492496 G3V318 75 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 FCN1O00602 326 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 IGLV1-40P01703 118 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 MYCNOSP40205 109 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 NDPQ00604 133 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 TMEM267Q0VDI3 215 aaPredicted RBP12.47□□□□□ -0.41
PKP4-214ENST00000492496 PDLIM3Q53GG5 364 aaPredicted RBP12.47□□□□□ -0.41
PKP4-214ENST00000492496 OXLD1Q5BKU9 147 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 C19orf54Q5BKX5 351 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 TMEM69Q5SWH9 247 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 C18orf65Q6ZTR6 163 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 C8orf86Q6ZUL3 223 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 RCC1LQ96I51 464 aaKnown RBP12.47□□□□□ -0.41
PKP4-214ENST00000492496 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 NUBP2Q9Y5Y2 271 aa12.47□□□□□ -0.41
PKP4-214ENST00000492496 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 LINC00473A8K010 186 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 SHOXO15266 292 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 SLC25A17O43808 307 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 DUS4LO95620 317 aaKnown RBP12.46□□□□□ -0.41
PKP4-214ENST00000492496 IGLV2-23P01705 113 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 PTHLHP12272 177 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 ALDH3B2P48448 385 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 RORCP51449 518 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 TAS2R20P59543 309 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 MSMO1Q15800 293 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 CTF1Q16619 201 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 TMEM65Q6PI78 240 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 PPP1R27Q86WC6 154 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 HARBI1Q96MB7 349 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 CLCC1Q96S66 551 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 P2RX4Q99571 388 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 RBMX2Q9Y388 322 aaKnown RBP12.46□□□□□ -0.41
PKP4-214ENST00000492496 FBXO7Q9Y3I1 522 aa12.46□□□□□ -0.41
PKP4-214ENST00000492496 J3QRK9 145 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 CA2P00918 260 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 APOA1P02647 267 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 EIF4EP06730 217 aaKnown RBP12.45□□□□□ -0.42
PKP4-214ENST00000492496 CRYGBP07316 175 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
PKP4-214ENST00000492496 ECSCRQ19T08 205 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 GPR107Q5VW38 600 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
PKP4-214ENST00000492496 MRPL41Q8IXM3 137 aaKnown RBP12.45□□□□□ -0.42
PKP4-214ENST00000492496 OR5AP2Q8NGF4 316 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms