RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	PECR	Q9BY49	303 aa		13.8	□□□□□ -0.2
GGA1-223	ENST00000491295	DUSP21	Q9H596	190 aa		13.8	□□□□□ -0.2
GGA1-223	ENST00000491295	AK6	Q9Y3D8	172 aa	Known RBP	13.8	□□□□□ -0.2
GGA1-223	ENST00000491295	IGHV3-11	P01762	117 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	TRGV3	P03979	118 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	FRMD6-AS1	P0C7T7	363 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	MRPS15	P82914	257 aa	Known RBP	13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	MLLT11	Q13015	90 aa	Predicted RBP	13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	C2orf76	Q3KRA6	126 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	FAM3D	Q96BQ1	224 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	GFI1	Q99684	422 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	RDH8	Q9NYR8	311 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	STUB1	Q9UNE7	303 aa		13.79	□□□□□ -0.2
GGA1-223	ENST00000491295	C13orf42	A0A1B0GVH6	325 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	DENR	O43583	198 aa	Known RBP	13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	CNIH1	O95406	144 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	HSMCR30	P0CW71	290 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	POC5	Q8NA72	575 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	ACOT13	Q9NPJ3	140 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	SLC35D1	Q9NTN3	355 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	RAB22A	Q9UL26	194 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295		V9GY05	133 aa		13.78	□□□□□ -0.2
GGA1-223	ENST00000491295	IGKV1-6	A0A0C4DH72	117 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295		A8MZ25	164 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295		M0R1X1	148 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	SLC25A17	O43808	307 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	IGLV1-51	P01701	117 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	AADAC	P22760	399 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	CBX3	Q13185	183 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	OVCH2	Q7RTZ1	564 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	ANKRD13B	Q86YJ7	626 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	ZNF355P	Q9NSJ1	428 aa		13.77	□□□□□ -0.21
GGA1-223	ENST00000491295	LDLRAD4	O15165	306 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	FABP7	O15540	132 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	RGS10	O43665	173 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	CD3G	P09693	182 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	RRAS	P10301	218 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	CALR	P27797	417 aa	Known RBP	13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	PLAC9	Q5JTB6	97 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	CASC10	Q5T4H9	136 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	OR10J5	Q8NHC4	309 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	GRPEL2	Q8TAA5	225 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	RAB3C	Q96E17	227 aa		13.76	□□□□□ -0.21
GGA1-223	ENST00000491295	TRIM64C	A6NLI5	447 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	CRYGB	P07316	175 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	LINC00205	P59089	165 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	RPS25	P62851	125 aa	Known RBP	13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	KLF5	Q13887	457 aa	Predicted RBP	13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	TATDN3	Q17R31	274 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	PRSS48	Q7RTY5	328 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	OR5T1	Q8NG75	326 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	USMG5	Q96IX5	58 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	MGLL	Q99685	303 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	CABLES2	Q9BTV7	478 aa		13.75	□□□□□ -0.21
GGA1-223	ENST00000491295	TRBV6-7	A0A0A0MS04	114 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295		H0Y980	276 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	IGLV2-23	P01705	113 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	GADD45A	P24522	165 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	CLDN12	P56749	244 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	FABP5	Q01469	135 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	RTL8B	Q17RB0	113 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	TMEM177	Q53S58	311 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	SGPP2	Q8IWX5	399 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295		Q8N1Y9	231 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	ADTRP	Q96IZ2	230 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	CITED4	Q96RK1	184 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	TM2D3	Q9BRN9	247 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	OR2D2	Q9H210	308 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	SDHAF2	Q9NX18	166 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	KCNK7	Q9Y2U2	307 aa		13.74	□□□□□ -0.21
GGA1-223	ENST00000491295	TRAV1-2	A0A0B4J238	106 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	TMEM272	A0A1B0GTI8	110 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	PDCD5	O14737	125 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	SHOX	O15266	292 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	FCGR3A	P08637	254 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	LYL1	P12980	280 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	SSBP2	P81877	361 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	TEX45	Q8NA69	505 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	HARBI1	Q96MB7	349 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	RSRP1	Q9BUV0	290 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	CCDC90B	Q9GZT6	254 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	C19orf73	Q9NVV2	129 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	SIGLEC8	Q9NYZ4	499 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	RYR3	Q15413	4870 aa		13.73	□□□□□ -0.21
GGA1-223	ENST00000491295	BET1	O15155	118 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	GSTT2	P0CG29	244 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	GSTT2B	P0CG30	244 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	IGHV4-30-4	P0DP06	118 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	RAB6A	P20340	208 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	CRHBP	P24387	322 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	AQP4	P55087	323 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	PJVK	Q0ZLH3	352 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	ARL6IP1	Q15041	203 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	IGSF11	Q5DX21	431 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	ZNF343	Q6P1L6	599 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295		Q6ZS49	121 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	OR9G4	Q8NGQ1	327 aa		13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	OR10R2	Q8NGX6	335 aa		13.72	□□□□□ -0.21

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