RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TMEM11P17152 192 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 ECI1P42126 302 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 HES1Q14469 280 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 KRTAP24-1Q3LI83 254 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 ZNF383Q8NA42 475 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 BVESQ8NE79 360 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
TRA2A-208ENST00000490942 SLC5A7Q9GZV3 580 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 TNFRSF19Q9NS68 423 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 SLC2A8Q9NY64 477 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 MOB4Q9Y3A3 225 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 CUBNO60494 3623 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 DISC1C4P0D8 188 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 FAUP35544 74 aaKnown RBP12.65□□□□□ -0.38
TRA2A-208ENST00000490942 EIF4EBP1Q13541 118 aaPredicted RBP12.65□□□□□ -0.38
TRA2A-208ENST00000490942 C11orf88Q6PI97 169 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 CMTM1Q8IZ96 169 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 Q8N2B8 174 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 MFSD4AQ8N468 514 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 OR4F5Q8NH21 305 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 TERB2Q8NHR7 220 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 SECTM1Q8WVN6 248 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 DDB2Q92466 427 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 C5orf30Q96GV9 206 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 ZNF486Q96H40 463 aaPredicted RBP12.65□□□□□ -0.38
TRA2A-208ENST00000490942 PRRT1Q99946 306 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 C16orf95Q9H693 158 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 MMP24Q9Y5R2 645 aa12.65□□□□□ -0.38
TRA2A-208ENST00000490942 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 M0QYG6 137 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 ZNF735P0CB33 412 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 CD24P25063 80 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 GNRHRP30968 328 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 COMPP49747 757 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-208ENST00000490942 FXYD4P59646 89 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 FOXL1Q12952 345 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 CBX3Q13185 183 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 KLF9Q13886 244 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-208ENST00000490942 SURF2Q15527 256 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-208ENST00000490942 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 AADACL3Q5VUY0 350 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 SLC38A6Q8IZM9 456 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 TOMM5Q8N4H5 51 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-208ENST00000490942 NPBQ8NG41 125 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 OR4C13Q8NGP0 309 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 CCL28Q9NRJ3 127 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 PRELID3BQ9Y3B1 194 aa12.64□□□□□ -0.39
TRA2A-208ENST00000490942 RNF212BA8MTL3 300 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 GPR31O00270 319 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 RBFOX2O43251 390 aaKnown RBP eCLIP12.63□□□□□ -0.393e-12■□□□□ 8.2
TRA2A-208ENST00000490942 SPDEFO95238 335 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 AMY2AP04746 511 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 S100GP29377 79 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 CD40LGP29965 261 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 KIR2DS2P43631 304 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 LGALS7P47929 136 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 CATR1Q13166 79 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 KCTD9Q7L273 389 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 TMEM219Q86XT9 240 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 TCTEX1D1Q8N7M0 179 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 DRAXINQ8NBI3 349 aaPredicted RBP12.63□□□□□ -0.39
TRA2A-208ENST00000490942 OR4C16Q8NGL9 310 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 FLYWCH2Q96CP2 140 aaKnown RBP12.63□□□□□ -0.39
TRA2A-208ENST00000490942 RSRP1Q9BUV0 290 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 C19orf24Q9BVV8 132 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 FXYD6Q9H0Q3 95 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 PLSCR3Q9NRY6 295 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 SLC35D1Q9NTN3 355 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 LIN7CQ9NUP9 197 aaKnown RBP12.63□□□□□ -0.39
TRA2A-208ENST00000490942 SCP2D1Q9UJQ7 156 aa12.63□□□□□ -0.39
TRA2A-208ENST00000490942 H7C2Y5 167 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 J3QRK9 145 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 RAG2P55895 527 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
TRA2A-208ENST00000490942 TMEM177Q53S58 311 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 TRIQKQ629K1 86 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 GLDNQ6ZMI3 551 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-208ENST00000490942 ZNF818PQ6ZRF7 136 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 Q6ZSV7 163 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 C5orf56Q8N8D9 126 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 OR4D10Q8NGI6 311 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 OSR1Q8TAX0 266 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-208ENST00000490942 CD300LFQ8TDQ1 290 aa12.62□□□□□ -0.39
TRA2A-208ENST00000490942 TSNAXQ99598 290 aaKnown RBP12.62□□□□□ -0.39
TRA2A-208ENST00000490942 SDHCQ99643 169 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-208ENST00000490942 FAM212BQ9NTI7 297 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-208ENST00000490942 LINC00473A8K010 186 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 NBR2O15453 112 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 NDUFA3O95167 84 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 AMY1AP04745 511 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 PPP5CP53041 499 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 RND3P61587 244 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 RELBQ01201 579 aa12.61□□□□□ -0.39
TRA2A-208ENST00000490942 HNF4GQ14541 408 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 711.1 ms