RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 IGKV1-39P01597 117 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 IGKV1-5P01602 117 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 TRGC2P03986 189 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 IGKV1D-39P04432 117 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 TRGC1P0CF51 173 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 PSG2P11465 335 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 CBR1P16152 277 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 OMGP23515 440 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 GDF1P27539 372 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 DDTP30046 118 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 NDUFA6P56556 154 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 FOXL2P58012 376 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 HTD2P86397 168 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 PLGLB1Q02325 96 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 MZT1Q08AG7 82 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 TGIF1Q15583 401 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 TMEM30BQ3MIR4 351 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 COX19Q49B96 90 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ZNF585BQ52M93 769 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ZNF766Q5HY98 468 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 NCMAPQ5T1S8 102 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 KCNIP4Q6PIL6 250 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 C6orf15Q6UXA7 325 aaPredicted RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 YRDCQ86U90 279 aaKnown RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 TMEM217Q8N7C4 229 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 SUMF1Q8NBK3 374 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 PRSS33Q8NF86 280 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 OR2M7Q8NG81 312 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 OR51H1Q8NH63 302 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 FGFBP3Q8TAT2 258 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 NEK7Q8TDX7 302 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ABHD5Q8WTS1 349 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 NEU4Q8WWR8 484 aaPredicted RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 FRZBQ92765 325 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 LHX4Q969G2 390 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 NEIL1Q96FI4 390 aaPredicted RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 CYYR1Q96J86 154 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 JSRP1Q96MG2 331 aaPredicted RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 TAAR6Q96RI8 345 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 HSD17B10Q99714 261 aaKnown RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 HIST1H2BLQ99880 126 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 SMIM7Q9BQ49 75 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ABHD14AQ9BUJ0 271 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ZNF665Q9H7R5 613 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 RAB9BQ9NP90 201 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ERRFI1Q9UJM3 462 aaPredicted RBP4.89□□□□□ -1.63
VPS41-214ENST00000490924 GAB2Q9UQC2 676 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 TP53TG5Q9Y2B4 290 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 DCHS1Q96JQ0 3298 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 DMDP11532 3685 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ARID1AO14497 2285 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 TGIF2-C20orf24A0A0A6YYL0 155 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 TRBV9A0A0B4J1U6 114 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 A0A0G2JRQ6 117 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 OOEPA6NGQ2 149 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 LRRC30A6NM36 301 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 PMS2P5A8MQ11 134 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 IQCF6A8MYZ5 107 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 SLC33A1O00400 549 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 MLNRO43193 412 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 NEURL1O76050 574 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 CELA2AP08217 269 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 SOD3P08294 240 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 RFPL3SP0C7P2 107 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ESDP10768 282 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 CD1BP29016 333 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 GPX4P36969 197 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 CFHR2P36980 270 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 KIR2DS2P43631 304 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 RPL19P84098 196 aaKnown RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 RUNX1Q01196 453 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 TGFBR3Q03167 851 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 IQCJQ1A5X6 159 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 TBC1D28Q2M2D7 210 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ACTL10Q5JWF8 245 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ABHD17BQ5VST6 288 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 FBXW9Q5XUX1 488 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 BTNL3Q6UXE8 466 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 CLEC9AQ6UXN8 241 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 SPNS3Q6ZMD2 512 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 Q6ZRM9 215 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 HAPLN4Q86UW8 402 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 FGFRL1Q8N441 504 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 RPP25LQ8N5L8 163 aaKnown RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 FAM169BQ8N8A8 192 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ZNF709Q8N972 641 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 C1orf162Q8NEQ5 155 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 OR10P1Q8NGE3 313 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 OR1K1Q8NGR3 316 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 OR1P1Q8NH06 330 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ABHD3Q8WU67 409 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 BCL2L2Q92843 193 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 TMEM18Q96B42 140 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 LURAP1Q96LR2 239 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 WWC2-AS2Q96NR7 200 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms