RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CA2P00918 260 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 APOA2P02652 100 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 HIST1H1DP16402 221 aaKnown RBP9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 RAB6AP20340 208 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 GADD45AP24522 165 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 CRIP2P52943 208 aaPredicted RBP9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 ACTBL2Q562R1 376 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 UNQ5815/PRO19632Q6UWF5 114 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF562Q6V9R5 426 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 LFNGQ8NES3 379 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 OR10J5Q8NHC4 309 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 DCUN1D4Q92564 292 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 FLYWCH2Q96CP2 140 aaKnown RBP9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 ATG5Q9H1Y0 275 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 ELF5Q9UKW6 265 aaPredicted RBP9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 TRBV6-7A0A0A0MS04 114 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 METTL21EPA6NDL7 271 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 MFNGO00587 321 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 SLC25A17O43808 307 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 IGHV3-11P01762 117 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 GALP22466 123 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 PSMB9P28065 219 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 TALDO1P37837 337 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 SLURP1P55000 103 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 GABARAPL2P60520 117 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 DCTN2Q13561 401 aaKnown RBP9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 ARFRP1Q13795 201 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 FXYD3Q14802 87 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 AKIRIN2Q53H80 203 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 PDPNQ86YL7 162 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 SPARTQ8N0X7 666 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 TCTEX1D1Q8N7M0 179 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 GRPEL2Q8TAA5 225 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 DLX4Q92988 240 aaPredicted RBP9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 TOLLIPQ9H0E2 274 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 OR2D2Q9H210 308 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 SLC35D1Q9NTN3 355 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 SDHAF2Q9NX18 166 aa9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 LSM4Q9Y4Z0 139 aaKnown RBP9.24□□□□□ -0.93
CCHCR1-215ENST00000488920 IGKV1D-8A0A087WSZ0 117 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 OVOL1O14753 267 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 ARPC1BO15143 372 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 MRPS14O60783 128 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 SPDEFO95238 335 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 CNIH1O95406 144 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 LGALS1P09382 135 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 PJVKQ0ZLH3 352 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 CDNFQ49AH0 187 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 UBE2UQ5VVX9 321 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 OR5T1Q8NG75 326 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 ARPC1AQ92747 370 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 C5orf30Q96GV9 206 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 GINS4Q9BRT9 223 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 CABLES2Q9BTV7 478 aa9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 TXNL4BQ9NX01 149 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 RBM7Q9Y580 266 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-215ENST00000488920 IGHV4OR15-8A0A075B7B6 117 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 A0A087WW49 117 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 LINC01619G3V211 115 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 J3QRK9 145 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 LY86O95711 162 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 IGLV2-23P01705 113 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 CD40LGP29965 261 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 TPPP2P59282 170 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 PYHIN1Q6K0P9 492 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 BVESQ8NE79 360 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 ST6GALNAC5Q9BVH7 336 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF355PQ9NSJ1 428 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF256Q9Y2P7 627 aaPredicted RBP9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 DNAH9Q9NYC9 4486 aa9.22□□□□□ -0.93
CCHCR1-215ENST00000488920 SRRM4A7MD48 611 aaKnown RBP9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 NOTOA8MTQ0 251 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 SHOXO15266 292 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 SAP30O75446 220 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 DIRAS3O95661 229 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 TRGV3P03979 118 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 HSPB1P04792 205 aaKnown RBP9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 CRYGBP07316 175 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 FGF9P31371 208 aaPredicted RBP9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 LGALS7P47929 136 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 INSL3P51460 131 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 SSBP2P81877 361 aaPredicted RBP9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 SRSF7Q16629 238 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 ZNF429Q86V71 674 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 H1FOOQ8IZA3 346 aaPredicted RBP9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 RHOVQ96L33 236 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 HARBI1Q96MB7 349 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 ASCL2Q99929 193 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 Q9H521 79 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 DAPK2Q9UIK4 370 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 STUB1Q9UNE7 303 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 SSR3Q9UNL2 185 aa9.21□□□□□ -0.94
CCHCR1-215ENST00000488920 CBX3Q13185 183 aa9.2□□□□□ -0.94
CCHCR1-215ENST00000488920 RTL8BQ17RB0 113 aa9.2□□□□□ -0.94
CCHCR1-215ENST00000488920 TMEM177Q53S58 311 aa9.2□□□□□ -0.94
CCHCR1-215ENST00000488920 HACD4Q5VWC8 232 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms