RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 SCAF11Q99590 1463 aaKnown RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 A0A087WX48 190 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 FABP5P3A8MUU1 101 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 TMX2-CTNND1H3BSU7 103 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 MMP23AO75900 390 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 ARL6IP5O75915 188 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 DPM2O94777 84 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 NCR2O95944 276 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 IGHV3-23P01764 117 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 IGHV2-5P01817 119 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 IGKV3-11P04433 115 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 LGALS1P09382 135 aaKnown RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 LINC00032P0C843 101 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 CNTFRP26992 372 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 GLRXP35754 106 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 KIR2DS2P43631 304 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 ZNF140P52738 457 aaPredicted RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 MTPNP58546 118 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 PFN3P60673 137 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 RPS25P62851 125 aaKnown RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 HBG1P69891 147 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 HBG2P69892 147 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 CAV1Q03135 178 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 FABP9Q0Z7S8 132 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 HERPUD1Q15011 391 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 PAFAH1B3Q15102 231 aaKnown RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 SFXN4Q6P4A7 337 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 UNQ9370/PRO34162Q6UXP9 181 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 STAC2Q6ZMT1 411 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 CYS1Q717R9 158 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 C9orf40Q8IXQ3 194 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 OR4M1Q8NGD0 313 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 OR52R1Q8NGF1 315 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 OR13C8Q8NGS7 320 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 OR10D3Q8NH80 312 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 DCAKDQ8WVC6 231 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 APOBEC3DQ96AK3 386 aaPredicted RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 SLC35E1Q96K37 410 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 SMIM8Q96KF7 97 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 LYSMD1Q96S90 227 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 THTPAQ9BU02 230 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 NKX6-2Q9C056 277 aaPredicted RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 OR2J1Q9GZK6 312 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 OR52D1Q9H346 318 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 Q9H3A6 140 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 TAS2R8Q9NYW2 309 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 WRAP73Q9P2S5 460 aaPredicted RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 CYSLTR1Q9Y271 337 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 NOP16Q9Y3C1 178 aaKnown RBP3.12□□□□□ -1.91
VPS8-224ENST00000488255 NALCNQ8IZF0 1738 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 MAP3K1Q13233 1512 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 ABCA10Q8WWZ4 1543 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 BICRAQ9NZM4 1560 aa3.12□□□□□ -1.91
VPS8-224ENST00000488255 OVOS2A0A0G2JMS6 1433 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 DISP2A7MBM2 1401 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 COL4A4P53420 1690 aaPredicted RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 A0A087WUU8 490 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 A0A1B0GWB2 263 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 DUXBA0A1W2PPF3 345 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 CDC42EP2O14613 210 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 MRPS14O60783 128 aaKnown RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 AIFM1O95831 613 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 IGHG2P01859 326 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 MT-ND4LP03901 98 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 CRYBA1P05813 215 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 GPX1P07203 203 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 SOD3P08294 240 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 OR5AC1P0C628 307 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 ZNF250P15622 560 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 RPS4Y1P22090 263 aaKnown RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 GABRA3P34903 492 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 RHOGP84095 191 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 PLCXD2Q0VAA5 305 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 C1DQ13901 141 aaKnown RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 GGTLC2Q14390 218 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 IHHQ14623 411 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 IQCJQ1A5X6 159 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 ZNF404Q494X3 552 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 TIGITQ495A1 244 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 LDLRAD2Q5SZI1 272 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 NCMAPQ5T1S8 102 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 IBA57Q5T440 356 aaKnown RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 ZNF57Q68EA5 555 aaPredicted RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 UFSP1Q6NVU6 142 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 RPL22L1Q6P5R6 122 aaKnown RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 MORN3Q6PF18 240 aaPredicted RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 GAPTQ8N292 157 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 TMEM86AQ8N2M4 240 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 DEDD2Q8WXF8 326 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 ARPC1AQ92747 370 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 DERL3Q96Q80 235 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 MRPL57Q9BQC6 102 aaKnown RBP3.11□□□□□ -1.91
VPS8-224ENST00000488255 EMC6Q9BV81 110 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 OR2H1Q9GZK4 316 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 OR8D2Q9GZM6 311 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 LPAR5Q9H1C0 372 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 GLIPR2Q9H4G4 154 aa3.11□□□□□ -1.91
VPS8-224ENST00000488255 CWH43Q9H720 699 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms