RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
TRIM50-203ENST00000488217 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.52
TRIM50-203ENST00000488217 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 TRIM64CA6NLI5 447 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 SPDEFO95238 335 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 RAB11BQ15907 218 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 PDPNQ86YL7 162 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 CMSS1Q9BQ75 279 aaKnown RBP11.77□□□□□ -0.53
TRIM50-203ENST00000488217 PECRQ9BY49 303 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 C12orf4Q9NQ89 552 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 RDH8Q9NYR8 311 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 BLOC1S6Q9UL45 172 aa11.77□□□□□ -0.53
TRIM50-203ENST00000488217 A0A0G2JLM5 398 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 ARL6IP5O75915 188 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 CNIH1O95406 144 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 HSMCR30P0CW71 290 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 RANBP1P43487 201 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 LGALS7P47929 136 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 PSMD7P51665 324 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 TRAM1Q15629 374 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 PLAC9Q5JTB6 97 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 Q8N1Y9 231 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
TRIM50-203ENST00000488217 DYNC2H1Q8NCM8 4307 aaKnown RBP11.76□□□□□ -0.53
TRIM50-203ENST00000488217 C13orf42A0A1B0GVH6 325 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 M0R1X1 148 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 RGS10O43665 173 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 SLC25A17O43808 307 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 APOA2P02652 100 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 SERPINB10P48595 397 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 CLDN12P56749 244 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 ANKRD13BQ86YJ7 626 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 POC5Q8NA72 575 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.75□□□□□ -0.53
TRIM50-203ENST00000488217 OR56B1Q8NGI3 324 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 TMEM68Q96MH6 324 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 RAB22AQ9UL26 194 aa11.75□□□□□ -0.53
TRIM50-203ENST00000488217 RYR2Q92736 4967 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 H3BUA1 57 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 IGLV1-51P01701 117 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 CRYGBP07316 175 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 LYL1P12980 280 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 ZP3P21754 424 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 PSMA1P25786 263 aaKnown RBP11.74□□□□□ -0.53
TRIM50-203ENST00000488217 RPS25P62851 125 aaKnown RBP11.74□□□□□ -0.53
TRIM50-203ENST00000488217 PJVKQ0ZLH3 352 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 KLF5Q13887 457 aaPredicted RBP11.74□□□□□ -0.53
TRIM50-203ENST00000488217 SRSF7Q16629 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRIM50-203ENST00000488217 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 PRSS48Q7RTY5 328 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 OR4A4PQ8NGN8 299 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 SLC35D1Q9NTN3 355 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 STUB1Q9UNE7 303 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 V9GY05 133 aa11.74□□□□□ -0.53
TRIM50-203ENST00000488217 ANKRD34BA5PLL1 514 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 A8MZ25 164 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 LDLRAD4O15165 306 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 FABP7O15540 132 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 BRI3O95415 125 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 IGLV2-23P01705 113 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 CD3GP09693 182 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 GSTT2P0CG29 244 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 GSTT2BP0CG30 244 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 CALRP27797 417 aaKnown RBP11.73□□□□□ -0.53
TRIM50-203ENST00000488217 SSBP2P81877 361 aaPredicted RBP11.73□□□□□ -0.53
TRIM50-203ENST00000488217 MRPS15P82914 257 aaKnown RBP11.73□□□□□ -0.53
TRIM50-203ENST00000488217 TAGLNQ01995 201 aaKnown RBP11.73□□□□□ -0.53
TRIM50-203ENST00000488217 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 RSRP1Q9BUV0 290 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 C19orf73Q9NVV2 129 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 SDHAF2Q9NX18 166 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 KCNK7Q9Y2U2 307 aa11.73□□□□□ -0.53
TRIM50-203ENST00000488217 STAB2Q8WWQ8 2551 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 BET1O15155 118 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 MRPS14O60783 128 aaKnown RBP11.72□□□□□ -0.53
TRIM50-203ENST00000488217 IGHV4-30-4P0DP06 118 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 FABP5Q01469 135 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 MLLT11Q13015 90 aaPredicted RBP11.72□□□□□ -0.53
TRIM50-203ENST00000488217 TATDN3Q17R31 274 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 IGSF11Q5DX21 431 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 OR10J5Q8NHC4 309 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 RAB3CQ96E17 227 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 CITED4Q96RK1 184 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 ACOT13Q9NPJ3 140 aa11.72□□□□□ -0.53
TRIM50-203ENST00000488217 SORL1Q92673 2214 aa11.71□□□□□ -0.53
TRIM50-203ENST00000488217 TRBV6-7A0A0A0MS04 114 aa11.71□□□□□ -0.53
TRIM50-203ENST00000488217 TMEM272A0A1B0GTI8 110 aa11.71□□□□□ -0.53
TRIM50-203ENST00000488217 SRRM4A7MD48 611 aaKnown RBP11.71□□□□□ -0.53
TRIM50-203ENST00000488217 H0Y980 276 aa11.71□□□□□ -0.53
TRIM50-203ENST00000488217 SHOXO15266 292 aa11.71□□□□□ -0.53
TRIM50-203ENST00000488217 TNFAIP8O95379 198 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms