RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 ARAP2Q8WZ64 1704 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 A0A1B0GU33 70 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 A0A1W2PNM2 257 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 DHRS12A0PJE2 317 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MYBPHLA2RUH7 354 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 METTL15A6NJ78 407 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 FAM159BA6NKW6 160 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 F8W036 122 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 KPNA3O00505 521 aaPredicted RBP2.12□□□□□ -2.07
USP48-209ENST00000487880 PIAS1O75925 651 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 OR2B3O76000 313 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 CDS2O95674 445 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 SNAP29O95721 258 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 LDOC1O95751 146 aaPredicted RBP2.12□□□□□ -2.07
USP48-209ENST00000487880 NPPAP01160 153 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 IFNA7P01567 189 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 CD8AP01732 235 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 IFNA4P05014 189 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 S100A8P05109 93 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 CALB1P05937 261 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MLNP12872 115 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 HTR2CP28335 458 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 HOXA6P31267 233 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 SPAM1P38567 509 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MAGEA12P43365 314 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MARCKSL1P49006 195 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 RAB13P51153 203 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 SNAP25P60880 206 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 RAB4BP61018 213 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 RAB14P61106 215 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 PSME3P61289 254 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 DHRS2Q13268 280 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 NEDD8Q15843 81 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 HSD17B12Q53GQ0 312 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 DHFR2Q86XF0 187 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 C8orf59Q8N0T1 100 aaPredicted RBP2.12□□□□□ -2.07
USP48-209ENST00000487880 GDPD1Q8N9F7 314 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 BPIFB6Q8NFQ5 453 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 OR52E4Q8NGH9 312 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MCFD2Q8NI22 146 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 CACNG8Q8WXS5 425 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 C22orf15Q8WYQ4 148 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 RORBQ92753 470 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 TESCQ96BS2 214 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 ADTRPQ96IZ2 230 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 PPP3R2Q96LZ3 170 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MBOAT7Q96N66 472 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 SERPINB11Q96P15 392 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 ACOT13Q9NPJ3 140 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 IMP3Q9NV31 184 aaKnown RBP2.12□□□□□ -2.07
USP48-209ENST00000487880 FBXL12Q9NXK8 326 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 TAS2R9Q9NYW1 312 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 USE1Q9NZ43 259 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 TMEM216Q9P0N5 145 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 COQ4Q9Y3A0 265 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 TPRKBQ9Y3C4 175 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 MIA3Q5JRA6 1907 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 ARFGEF2Q9Y6D5 1785 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 NHSL1Q5SYE7 1610 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 CICQ96RK0 1608 aaPredicted RBP2.12□□□□□ -2.07
USP48-209ENST00000487880 NRXN3Q9Y4C0 1643 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 PTPRJQ12913 1337 aa2.12□□□□□ -2.07
USP48-209ENST00000487880 TMEM2Q9UHN6 1383 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 PAPPAQ13219 1627 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 hCG_1818297A0A087WSY0 165 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 A0A0B4J2C4 111 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 FAM92AA1XBS5 289 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 CD300LBA8K4G0 201 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 I3L521 148 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 APOC4-APOC2K7ER74 178 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 SLC31A1O15431 190 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 ZMPSTE24O75844 475 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 HLA-AP01891 365 aaKnown RBP2.11□□□□□ -2.07
USP48-209ENST00000487880 APOC2P02655 101 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 CECR9P0C854 216 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 STAG3L2P0CL84 134 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 SMIM6P0DI80 62 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 HLA-EP13747 358 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 ADORA1P30542 326 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 MAGEA3P43357 314 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 RPL14P50914 215 aaKnown RBP2.11□□□□□ -2.07
USP48-209ENST00000487880 NKX2-5P52952 324 aaPredicted RBP2.11□□□□□ -2.07
USP48-209ENST00000487880 MGAT3Q09327 533 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 LRRC26Q2I0M4 334 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 UBE2NLQ5JXB2 153 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 GLYATQ6IB77 296 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 SPNS3Q6ZMD2 512 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 TPGS1Q6ZTW0 290 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 GALNT10Q86SR1 603 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 PHF13Q86YI8 300 aaPredicted RBP2.11□□□□□ -2.07
USP48-209ENST00000487880 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.11□□□□□ -2.07
USP48-209ENST00000487880 Q8NAQ8 132 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 OR6N2Q8NGY6 317 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 OR51Q1Q8NH59 317 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 C2orf15Q8WU43 125 aaKnown RBP2.11□□□□□ -2.07
USP48-209ENST00000487880 KCTD4Q8WVF5 259 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 CANT1Q8WVQ1 401 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 CYGBQ8WWM9 190 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 OR5P3Q8WZ94 311 aa2.11□□□□□ -2.07
USP48-209ENST00000487880 CCL17Q92583 94 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms