RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NPSP0C0P6 89 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 SPCS3P61009 180 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 PCBD1P61457 104 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 FOXO1Q12778 655 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 MRGPRDQ8TDS7 321 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 SEMA5BQ9P283 1151 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 POLR3KQ9Y2Y1 108 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-211ENST00000486901 U3KQA8 63 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 OR2H2O95918 312 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 MT-CO3P00414 261 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 SLC25A6P12236 298 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 CNN1P51911 297 aaKnown RBP10.44□□□□□ -0.74
HSPG2-211ENST00000486901 EDDM3AQ14507 147 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 AGBL5Q8NDL9 886 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 OR5A2Q8NGI9 324 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 HINT2Q9BX68 163 aa10.44□□□□□ -0.74
HSPG2-211ENST00000486901 COX5BP10606 129 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 CDKN1AP38936 164 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 TCL1AP56279 114 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 DPPA3Q6W0C5 159 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 Q6ZVH6 145 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 CADM4Q8NFZ8 388 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 MBD3L1Q8WWY6 194 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 MUC6Q6W4X9 2439 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 ODAMA1E959 279 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 B4E171 279 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.74
HSPG2-211ENST00000486901 TSPAN7P41732 249 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 OR8G5Q8NG78 346 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 OR5R1Q8NH85 324 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 C2orf88Q9BSF0 95 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 C1QTNF5Q9BXJ0 243 aa10.43□□□□□ -0.74
HSPG2-211ENST00000486901 MAGEA5P43359 124 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 NUFIP2Q7Z417 695 aaKnown RBP10.42□□□□□ -0.74
HSPG2-211ENST00000486901 IL36GQ9NZH8 169 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 ACTL6BO94805 426 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 SSTR5P35346 364 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 FOLR3P41439 243 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 GABRA2P47869 451 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 GNB1P62873 340 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 ATOH7Q8N100 152 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 OR10P1Q8NGE3 313 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 ZDHHC11Q9H8X9 412 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 PARD6AQ9NPB6 346 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 OR6C3Q9NZP0 311 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 IGF2RP11717 2491 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 ADGRG4Q8IZF6 3080 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 TACC2O95359 2948 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 GJE1A6NN92 205 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-211ENST00000486901 EPHA8P29322 1005 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-211ENST00000486901 ADMP35318 185 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 RAB4BP61018 213 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 GCNT2Q8N0V5 402 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 FAM122AQ96E09 287 aa10.42□□□□□ -0.74
HSPG2-211ENST00000486901 PSPNO60542 156 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 IRF2P14316 349 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 PLGLB1Q02325 96 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 OR5I1Q13606 314 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 ERASQ7Z444 233 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-211ENST00000486901 OR2J1Q9GZK6 312 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 TRAV1-1A0A0B4J248 108 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 DTD1Q8TEA8 209 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 TMEM170AQ8WVE7 144 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 NEIL1Q96FI4 390 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-211ENST00000486901 NEU1Q99519 415 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 HSPB9Q9BQS6 159 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 NAGKQ9UJ70 344 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 CACNA1AO00555 2505 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 SCO2A0A1W2PP80 73 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 A0A1W2PPV4 95 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 AQP7O14520 342 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 SRD5A2P31213 254 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 KRTDAPP60985 99 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 PLP2Q04941 152 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 LEAP2Q969E1 77 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 TP53TG5Q9Y2B4 290 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
HSPG2-211ENST00000486901 PLCE1Q9P212 2302 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 CSMD1Q96PZ7 3565 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 CDC34P49427 236 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-211ENST00000486901 SERF2P84101 59 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 MIC13Q5XKP0 118 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 Q6ZSR3 168 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 WDR86Q86TI4 376 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 C5orf30Q96GV9 206 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 NPCDR1Q9BY65 106 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 CTDSP1Q9GZU7 261 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 PSG11Q9UQ72 335 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 KALRNO60229 2985 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 TRBV20OR9-2A0A075B6H5 130 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 M0R143 59 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 CLDN14O95500 239 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 CTXN2P0C2S0 81 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 PPP1CBP62140 327 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 ABLIM2Q6H8Q1 611 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms