RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 FCER2P06734 321 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 PRSS3P35030 304 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 THBS3P49746 956 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 TMBIM6P55061 237 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 TAGLNQ01995 201 aaKnown RBP14.34□□□□□ -0.11
COL1A1-207ENST00000486572 SPCS2Q15005 226 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 LIN54Q6MZP7 749 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 ADTRPQ96IZ2 230 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 FBXL15Q9H469 300 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 ZNF580Q9UK33 172 aa14.34□□□□□ -0.11
COL1A1-207ENST00000486572 TSSC4Q9Y5U2 329 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-207ENST00000486572 IGKV1D-13A0A0B4J2D9 117 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 SLC22A5O76082 557 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 SPDEFO95238 335 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 IGF1P05019 195 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 IGKV1-13P0DP09 117 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 CBX3Q13185 183 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 PLGLAQ15195 96 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 KHDC1LQ5JSQ8 128 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 COMMD1Q8N668 190 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 OR4F17Q8NGA8 305 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 OR5AP2Q8NGF4 316 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 FLYWCH2Q96CP2 140 aaKnown RBP14.33□□□□□ -0.12
COL1A1-207ENST00000486572 OR4F4Q96R69 305 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 TSNAXQ99598 290 aaKnown RBP14.33□□□□□ -0.12
COL1A1-207ENST00000486572 ANAPC10Q9UM13 185 aa14.33□□□□□ -0.12
COL1A1-207ENST00000486572 MRPS7Q9Y2R9 242 aaKnown RBP14.33□□□□□ -0.12
COL1A1-207ENST00000486572 IGHV7-81A0A0B4J1V7 117 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 NOL3O60936 208 aaKnown RBP14.32□□□□□ -0.12
COL1A1-207ENST00000486572 OR5H8P0DN80 308 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 VDAC1P21796 283 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 FCGR2CP31995 323 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 DUTP33316 252 aaKnown RBP14.32□□□□□ -0.12
COL1A1-207ENST00000486572 RPS16P62249 146 aaKnown RBP14.32□□□□□ -0.12
COL1A1-207ENST00000486572 CDK10Q15131 360 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 PSG5Q15238 335 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 RTL8BQ17RB0 113 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 R3HDM4Q96D70 268 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 OR51J1Q9H342 316 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 METTL1Q9UBP6 276 aaKnown RBP14.32□□□□□ -0.12
COL1A1-207ENST00000486572 SCOCQ9UIL1 159 aa14.32□□□□□ -0.12
COL1A1-207ENST00000486572 ATP6V0E1O15342 81 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 RRASP10301 218 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 AADACP22760 399 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 TEX38Q6PEX7 206 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 SNX29P2Q8IUI4 249 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 BVESQ8NE79 360 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 DDB2Q92466 427 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 SCPEP1Q9HB40 452 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 PARP11Q9NR21 331 aa14.31□□□□□ -0.12
COL1A1-207ENST00000486572 RBMX2Q9Y388 322 aaKnown RBP14.31□□□□□ -0.12
COL1A1-207ENST00000486572 LINC00473A8K010 186 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 PPYP01298 95 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 IGLV2-14P01704 120 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 NAT1P18440 290 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 LGALS7P47929 136 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 CFHR3Q02985 330 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 TMEM177Q53S58 311 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 GPX8Q8TED1 209 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 HARBI1Q96MB7 349 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 ADAM30Q9UKF2 790 aa14.3□□□□□ -0.12
COL1A1-207ENST00000486572 SLC25A17O43808 307 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 PF4V1P10720 104 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 TAS2R46P59540 309 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 RPL23AP62750 156 aaKnown RBP14.29□□□□□ -0.12
COL1A1-207ENST00000486572 CX3CL1P78423 397 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 NDPQ00604 133 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 FOXE3Q13461 319 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 ZNF660Q6AZW8 331 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-207ENST00000486572 DYNC2LI1Q8TCX1 351 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 SECTM1Q8WVN6 248 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 GIMAP1Q8WWP7 306 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 EHFQ9NZC4 300 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 CCDC59Q9P031 241 aaKnown RBP14.29□□□□□ -0.12
COL1A1-207ENST00000486572 EXTL2Q9UBQ6 330 aa14.29□□□□□ -0.12
COL1A1-207ENST00000486572 H3BMQ9 156 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 FCN1O00602 326 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 SHOXO15266 292 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 CRYZL1O95825 349 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 IGLV2-23P01705 113 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 IGHG4P01861 327 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 ELANEP08246 267 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 MSMO1Q15800 293 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 CXorf66Q5JRM2 361 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-207ENST00000486572 OVCH2Q7RTZ1 564 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 OR5H2Q8NGV7 314 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 CLCC1Q96S66 551 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 HSD17B10Q99714 261 aaKnown RBP14.28□□□□□ -0.12
COL1A1-207ENST00000486572 ZFP57Q9NU63 452 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 PRELID3BQ9Y3B1 194 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 WSB1Q9Y6I7 421 aa14.28□□□□□ -0.12
COL1A1-207ENST00000486572 TRAV41A0A0B4J266 112 aa14.27□□□□□ -0.13
COL1A1-207ENST00000486572 G3V318 75 aa14.27□□□□□ -0.13
COL1A1-207ENST00000486572 SULT1C2O00338 296 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms