RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SLC25A17O43808 307 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 RBBP9O75884 186 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 SCGNO76038 276 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 IGHG4P01861 327 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 ELANEP08246 267 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 NFYAP23511 347 aaPredicted RBP9.6□□□□□ -0.87
MSH5-216ENST00000484309 RPS19P39019 145 aaKnown RBP9.6□□□□□ -0.87
MSH5-216ENST00000484309 TIMM50Q3ZCQ8 353 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 FOXB2Q5VYV0 432 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 Q6ZS49 121 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 PDPNQ86YL7 162 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
MSH5-216ENST00000484309 BVESQ8NE79 360 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 CASTOR1Q8WTX7 329 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 RAX2Q96IS3 184 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 KLK15Q9H2R5 256 aa9.6□□□□□ -0.87
MSH5-216ENST00000484309 A0A1W2PN81 502 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 DIRAS3O95661 229 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 CA2P00918 260 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 OR5H8P0DN80 308 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 PSMB8P28062 276 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 PPIFP30405 207 aaKnown RBP9.59□□□□□ -0.87
MSH5-216ENST00000484309 CHRNA7P36544 502 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 MYCNOSP40205 109 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 CX3CL1P78423 397 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 SRSF7Q16629 238 aaKnown RBP eCLIP9.59□□□□□ -0.872e-7■■■■□ 24.5
MSH5-216ENST00000484309 GVQW1Q8N7I0 195 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 FLYWCH2Q96CP2 140 aaKnown RBP9.59□□□□□ -0.87
MSH5-216ENST00000484309 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 TSNAXQ99598 290 aaKnown RBP9.59□□□□□ -0.87
MSH5-216ENST00000484309 ZNF580Q9UK33 172 aa9.59□□□□□ -0.87
MSH5-216ENST00000484309 MEIS3P1A6NDR6 274 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 LINC00473A8K010 186 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 CCL24O00175 119 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 SOX15O60248 233 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 HOXD3P31249 432 aaPredicted RBP9.58□□□□□ -0.88
MSH5-216ENST00000484309 SCAND1P57086 179 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 NCS1P62166 190 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 GNB1P62873 340 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 PITPNAQ00169 270 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 ZNF660Q6AZW8 331 aaPredicted RBP9.58□□□□□ -0.88
MSH5-216ENST00000484309 TMEM65Q6PI78 240 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 RNF152Q8N8N0 203 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
MSH5-216ENST00000484309 HARBI1Q96MB7 349 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 P2RX4Q99571 388 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 FUNDC2Q9BWH2 189 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 DCSTAMPQ9H295 470 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 NECAP2Q9NVZ3 263 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 AURKAIP1Q9NWT8 199 aaPredicted RBP9.58□□□□□ -0.88
MSH5-216ENST00000484309 ANXA10Q9UJ72 324 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 SPATA2Q9UM82 520 aa9.58□□□□□ -0.88
MSH5-216ENST00000484309 IGKV1D-13A0A0B4J2D9 117 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 TRIM64CA6NLI5 447 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 SHOXO15266 292 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 IGLV2-23P01705 113 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 SMIM18P0DKX4 95 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 IGKV1-13P0DP09 117 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 EGR2P11161 476 aaPredicted RBP9.57□□□□□ -0.88
MSH5-216ENST00000484309 SLC6A1P30531 599 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 DUTP33316 252 aaKnown RBP9.57□□□□□ -0.88
MSH5-216ENST00000484309 CDX1P47902 265 aaPredicted RBP9.57□□□□□ -0.88
MSH5-216ENST00000484309 LUMP51884 338 aaPredicted RBP9.57□□□□□ -0.88
MSH5-216ENST00000484309 ARPC4P59998 168 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 VBP1P61758 197 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 PJVKQ0ZLH3 352 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 OR2B11Q5JQS5 317 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 CNIH2Q6PI25 160 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 UNQ5815/PRO19632Q6UWF5 114 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 PPP1R27Q86WC6 154 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 SAMD12Q8N8I0 201 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 LFNGQ8NES3 379 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 BEST4Q8NFU0 473 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 GRPEL2Q8TAA5 225 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 RNF5Q99942 180 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 AUNIPQ9H7T9 357 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 OR2W1Q9Y3N9 320 aa9.57□□□□□ -0.88
MSH5-216ENST00000484309 ARPC1BO15143 372 aaKnown RBP9.56□□□□□ -0.88
MSH5-216ENST00000484309 TUSC2O75896 110 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 SPDEFO95238 335 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 CRYZL1O95825 349 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 CTXN2P0C2S0 81 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 RAB9AP51151 201 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 KRTAP10-11P60412 298 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 CBX3Q13185 183 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 KIAA0141Q14154 515 aaPredicted RBP9.56□□□□□ -0.88
MSH5-216ENST00000484309 RTL8BQ17RB0 113 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 UBE2NLQ5JXB2 153 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 CROCCP3Q8IVE0 287 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 ZNF645Q8N7E2 425 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 ZNF491Q8N8L2 437 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 MINDY2Q8NBR6 621 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 MYOZ3Q8TDC0 251 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 DDB2Q92466 427 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms