RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 Q8N9W7 124 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 BEST4Q8NFU0 473 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 NPBQ8NG41 125 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 CHPT1Q8WUD6 406 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 ABHD14BQ96IU4 210 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 TSC22D3Q99576 134 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 RASL11BQ9BPW5 248 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 MRPL20Q9BYC9 149 aaKnown RBP7.89□□□□□ -1.15
CPSF4-213ENST00000484112 NAA50Q9GZZ1 169 aaKnown RBP7.89□□□□□ -1.15
CPSF4-213ENST00000484112 PLSCR3Q9NRY6 295 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 COMMD3Q9UBI1 195 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 ADAM30Q9UKF2 790 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 ELF5Q9UKW6 265 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-213ENST00000484112 WASHC3Q9Y3C0 194 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 OR2W1Q9Y3N9 320 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 IGKV1D-8A0A087WSZ0 117 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 H0YJW9 148 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 AP4M1O00189 453 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 NDUFA3O95167 84 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 SPDEFO95238 335 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 HLA-DQB1P01920 261 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 APOA2P02652 100 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 OR8U9P0C7N5 309 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 PRSS3P35030 304 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 THBS3P49746 956 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 LUMP51884 338 aaPredicted RBP7.88□□□□□ -1.15
CPSF4-213ENST00000484112 TAS2R46P59540 309 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 ACTBP60709 375 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 EGFEM1PQ0D2K5 195 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 CBX3Q13185 183 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 RPL39P5Q59GN2 51 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 SLC35E3Q7Z769 313 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF645Q8N7E2 425 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 OR5AP2Q8NGF4 316 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 OR8U1Q8NH10 309 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 MAFIPQ8WZ33 124 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 BORCS5Q969J3 196 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 ISOC1Q96CN7 298 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 PARP12Q9H0J9 701 aaKnown RBP7.88□□□□□ -1.15
CPSF4-213ENST00000484112 OR2D2Q9H210 308 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 IFT46Q9NQC8 304 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 SDHAF2Q9NX18 166 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 CCDC59Q9P031 241 aaKnown RBP7.88□□□□□ -1.15
CPSF4-213ENST00000484112 KIAA1456Q9P272 454 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 ANAPC10Q9UM13 185 aa7.88□□□□□ -1.15
CPSF4-213ENST00000484112 RBM7Q9Y580 266 aaKnown RBP7.88□□□□□ -1.15
CPSF4-213ENST00000484112 DNAH3Q8TD57 4116 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF736B4DX44 427 aaPredicted RBP7.87□□□□□ -1.15
CPSF4-213ENST00000484112 H7C2Y5 167 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 NBR2O15453 112 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 PROP1O75360 226 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 TUSC2O75896 110 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 HLA-DRB1P01911 266 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 IGF1P05019 195 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 EIF4EP06730 217 aaKnown RBP7.87□□□□□ -1.15
CPSF4-213ENST00000484112 OR5H8P0DN80 308 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 NAT1P18440 290 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 SLC6A1P30531 599 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 LGALS7P47929 136 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 SLC35B1P78383 322 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 MMDQ15546 238 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 FAM131AQ6UXB0 335 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 MRPL41Q8IXM3 137 aaKnown RBP7.87□□□□□ -1.15
CPSF4-213ENST00000484112 LINC00482Q8N8I6 264 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 ZBTB34Q8NCN2 500 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 GIMAP1Q8WWP7 306 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 TSNAXQ99598 290 aaKnown RBP7.87□□□□□ -1.15
CPSF4-213ENST00000484112 GPR61Q9BZJ8 451 aa7.87□□□□□ -1.15
CPSF4-213ENST00000484112 CCDC160A6NGH7 325 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 H3BMQ9 156 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 M0R1X1 148 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 ELK1P19419 428 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 F2RL1P55085 397 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 MRPS10P82664 201 aaKnown RBP7.86□□□□□ -1.15
CPSF4-213ENST00000484112 CDK10Q15131 360 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 RTL8BQ17RB0 113 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 C5orf64Q2M2E5 130 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF383Q8NA42 475 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 DYNC2LI1Q8TCX1 351 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 GPX8Q8TED1 209 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 FLYWCH2Q96CP2 140 aaKnown RBP7.86□□□□□ -1.15
CPSF4-213ENST00000484112 HSD17B10Q99714 261 aaKnown RBP7.86□□□□□ -1.15
CPSF4-213ENST00000484112 RNF150Q9ULK6 438 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 U3KQK5 164 aa7.86□□□□□ -1.15
CPSF4-213ENST00000484112 PSMB11A5LHX3 300 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 NUDT19A8MXV4 375 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 FAM25AB3EWG3 89 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 FAM25CB3EWG5 89 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 FAM25GB3EWG6 89 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 RRHO14718 337 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 HPGDSO60760 199 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 NFYAP23511 347 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 FCGR2CP31995 323 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 DUTP33316 252 aaKnown RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 RCVRNP35243 200 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 SSBP1Q04837 148 aaKnown RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 DCTN2Q13561 401 aaKnown RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 DYRK1AQ13627 763 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 SPCS2Q15005 226 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms