RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 PARP12Q9H0J9 701 aaKnown RBP11.4□□□□□ -0.58
SMAD9-204ENST00000483941 TMEM222Q9H0R3 208 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 SAA2-SAA4A0A096LPE2 208 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 LEUTXA8MZ59 168 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 M0R1X1 148 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 HAX1O00165 279 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 OR5AC1P0C628 307 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 SAA2P0DJI9 122 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-204ENST00000483941 RRASP10301 218 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 HLA-GP17693 338 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 UCP1P25874 307 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 ARHGDIBP52566 201 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 LGALS4P56470 323 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 SUPT4H1P63272 117 aaKnown RBP11.39□□□□□ -0.59
SMAD9-204ENST00000483941 SLC9A3R2Q15599 337 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 HLA-DRB5Q30154 266 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 VMO1Q7Z5L0 202 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 AKAP14Q86UN6 197 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 TEX29Q8N6K0 151 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 Q8N7P7 452 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 TCTEX1D2Q8WW35 142 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 PPP1R14BQ96C90 147 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 TMEM56Q96MV1 263 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 PCGF1Q9BSM1 259 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 SIRPDQ9H106 197 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 TMEM56-RWDD3S4R434 201 aa11.39□□□□□ -0.59
SMAD9-204ENST00000483941 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 SLC31A2O15432 143 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 TNFSF12O43508 249 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 CCNKO75909 580 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 CDS2O95674 445 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 IGLV1-47P01700 117 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 IGHV3-7P01780 117 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 COX7A1P24310 79 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 HTR1DP28221 377 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 MC5RP33032 325 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 UBE2E1P51965 193 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 CYCSP99999 105 aaKnown RBP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 TMEM187Q14656 261 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 RTL8BQ17RB0 113 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 MINOS1Q5TGZ0 78 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 ZNF833PQ6ZTB9 187 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 PNKDQ8N490 385 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 OR51H1Q8NH63 302 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 MMP26Q9NRE1 261 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 TBL2Q9Y4P3 447 aaKnown RBP11.38□□□□□ -0.59
SMAD9-204ENST00000483941 AUP1Q9Y679 476 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 MINOS1-NBL1R4GNA1 71 aa11.38□□□□□ -0.59
SMAD9-204ENST00000483941 A0A1W2PPE3 182 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 BUB1B-PAK6H3BSN5 160 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 CD5LO43866 347 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 APOA2P02652 100 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 ARG1P05089 322 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 RAB13P51153 203 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 EIF4EBP1Q13541 118 aaPredicted RBP11.37□□□□□ -0.59
SMAD9-204ENST00000483941 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 OR4S2Q8NH73 311 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 GLYATL2Q8WU03 294 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 RBPMSQ93062 196 aaKnown RBP11.37□□□□□ -0.59
SMAD9-204ENST00000483941 RPEQ96AT9 228 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 SPIN2AQ99865 258 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 SPIN2BQ9BPZ2 258 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 SIRT7Q9NRC8 400 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 YAE1D1Q9NRH1 226 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 HIF1ANQ9NWT6 349 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 DPM3Q9P2X0 92 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 MGAT4CQ9UBM8 478 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 CACFD1Q9UGQ2 172 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 SVEP1Q4LDE5 3571 aa11.37□□□□□ -0.59
SMAD9-204ENST00000483941 YLPM1P49750 1951 aaKnown RBP11.36□□□□□ -0.59
SMAD9-204ENST00000483941 A0A096LNT2 108 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 DBX1A6NMT0 343 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 HPRT1P00492 218 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 MMP9P14780 707 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 BPIFB3P59826 476 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 FCN2Q15485 313 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 ANKRD55Q3KP44 614 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 SP6Q3SY56 376 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 MIDNQ504T8 468 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 FAM53AQ6NSI3 398 aaPredicted RBP11.36□□□□□ -0.59
SMAD9-204ENST00000483941 GSG1LQ6UXU4 331 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 ODF3L1Q8IXM7 274 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 SPAG16Q8N0X2 631 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 MSI2Q96DH6 328 aaKnown RBP11.36□□□□□ -0.59
SMAD9-204ENST00000483941 TP53RKQ96S44 253 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms