RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
SRSF6-202ENST00000483871 CAPSLQ8WWF8 208 aa11.34□□□□□ -0.59
SRSF6-202ENST00000483871 RITA1Q96K30 269 aa11.34□□□□□ -0.59
SRSF6-202ENST00000483871 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
SRSF6-202ENST00000483871 FAM240BA0A1B0GVZ2 78 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 H3BUX3 64 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TXNL1O43396 289 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 NDUFB6O95139 128 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TCRBP04435 133 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 SNRNP70P08621 437 aaKnown RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 ECI1P42126 302 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 DCTN2Q13561 401 aaKnown RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 HABP2Q14520 560 aaPredicted RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 HNF4GQ14541 408 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 SURF2Q15527 256 aaPredicted RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 MSMO1Q15800 293 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 LY6EQ16553 131 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 LRRC75BQ2VPJ9 315 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 MZT2BQ6NZ67 158 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 CCBE1Q6UXH8 406 aaPredicted RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 KCTD9Q7L273 389 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TBC1D26Q86UD7 250 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TCTEX1D2Q8WW35 142 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 DDB2Q92466 427 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 DPAGT1Q9H3H5 408 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 C14orf166Q9Y224 244 aaKnown RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 FAM90A9PA6NNJ1 464 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 H7C2Y5 167 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 VENTXO95231 258 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 AKR1C4P17516 323 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 BRS3P32247 399 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 THBS3P49746 956 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 DEFA1P59665 94 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 DEFA3P59666 94 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TMED4Q7Z7H5 227 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 ZNF486Q96H40 463 aaPredicted RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 SCGB3A2Q96PL1 93 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 HSD17B10Q99714 261 aaKnown RBP11.33□□□□□ -0.6
SRSF6-202ENST00000483871 ESM1Q9NQ30 184 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 SLC35D1Q9NTN3 355 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 COPZ2Q9P299 210 aa11.33□□□□□ -0.6
SRSF6-202ENST00000483871 TRAV6A0A075B6T7 132 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
SRSF6-202ENST00000483871 MPPED1O15442 326 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 RAMP3O60896 148 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 FCGR3BO75015 233 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 PEX14O75381 377 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 CD1BP29016 333 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 HES1Q14469 280 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 ZDHHC22Q8N966 263 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 PALMDQ9NP74 551 aa11.32□□□□□ -0.6
SRSF6-202ENST00000483871 NIPBLQ6KC79 2804 aaeCLIP11.31□□□□□ -0.6
SRSF6-202ENST00000483871 SPNP16150 400 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 F2RP25116 425 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 DYNLT3P51808 116 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 RND3P61587 244 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 SCGB2A2Q13296 93 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 SP6Q3SY56 376 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 RBMS3Q6XE24 437 aaKnown RBP11.31□□□□□ -0.6
SRSF6-202ENST00000483871 TMEM219Q86XT9 240 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 SPAG16Q8N0X2 631 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 ENKURQ8TC29 256 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 ADTRPQ96IZ2 230 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
SRSF6-202ENST00000483871 C20orf85Q9H1P6 137 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 NUDT15Q9NV35 164 aa11.31□□□□□ -0.6
SRSF6-202ENST00000483871 APOA2P02652 100 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 ANXA7P20073 488 aaKnown RBP11.3□□□□□ -0.6
SRSF6-202ENST00000483871 CNTFRP26992 372 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 MC5RP33032 325 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 RAB25P57735 213 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 CATR1Q13166 79 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 AANATQ16613 207 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 CENPSQ8N2Z9 138 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 DUSP18Q8NEJ0 188 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 SSMEM1Q8WWF3 244 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 TCF19Q9Y242 345 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 WASHC3Q9Y3C0 194 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 TEX13DA0A0J9YY54 714 aaPredicted RBP11.3□□□□□ -0.6
SRSF6-202ENST00000483871 C3orf85A0A1B0GTC6 90 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 CRYM-AS1A6NIL9 109 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 CRYZL1O95825 349 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 S100GP29377 79 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 F2RL1P55085 397 aa11.3□□□□□ -0.6
SRSF6-202ENST00000483871 SUPT4H1P63272 117 aaKnown RBP11.3□□□□□ -0.6
SRSF6-202ENST00000483871 SRSF2Q01130 221 aaKnown RBP11.3□□□□□ -0.6
SRSF6-202ENST00000483871 EBI3Q14213 229 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms