RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SMIM8Q96KF7 97 aa21.59■■□□□ 1.05
SHOX2-204ENST00000483851 UBTD1Q9HAC8 227 aa21.59■■□□□ 1.05
SHOX2-204ENST00000483851 PITX3O75364 302 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 PRB1P04280 392 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 NFYBP25208 207 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 ID3Q02535 119 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 GPR157Q5UAW9 335 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 SLC25A48Q6ZT89 311 aaKnown RBP21.58■■□□□ 1.05
SHOX2-204ENST00000483851 SPAG16Q8N0X2 631 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 GPR146Q96CH1 333 aa21.58■■□□□ 1.05
SHOX2-204ENST00000483851 RBFOX2O43251 390 aaKnown RBP eCLIP21.58■■□□□ 1.04
SHOX2-204ENST00000483851 PROP1O75360 226 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 JTBO76095 146 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 MMP9P14780 707 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 P2RY1P47900 373 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 AKR1C2P52895 323 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 BTNL3Q6UXE8 466 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 C8orf31Q8N9H6 132 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 RNASE11Q8TAA1 199 aaKnown RBP21.58■■□□□ 1.04
SHOX2-204ENST00000483851 SPOCK3Q9BQ16 436 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 ZC4H2Q9NQZ6 224 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 COA4Q9NYJ1 87 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 PLA2G2EQ9NZK7 142 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 MMP24Q9Y5R2 645 aa21.58■■□□□ 1.04
SHOX2-204ENST00000483851 KIR2DS2P43631 304 aa21.57■■□□□ 1.04
SHOX2-204ENST00000483851 PRAMEF5Q5TYX0 476 aa21.57■■□□□ 1.04
SHOX2-204ENST00000483851 EIF5AL1Q6IS14 154 aaKnown RBP21.57■■□□□ 1.04
SHOX2-204ENST00000483851 ZNF841Q6ZN19 808 aa21.57■■□□□ 1.04
SHOX2-204ENST00000483851 UBAC2Q8NBM4 344 aa21.57■■□□□ 1.04
SHOX2-204ENST00000483851 MS4A7Q9GZW8 240 aaPredicted RBP21.57■■□□□ 1.04
SHOX2-204ENST00000483851 GPR137BO60478 399 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 IGKV1-5P01602 117 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 PVALBP20472 110 aaPredicted RBP21.56■■□□□ 1.04
SHOX2-204ENST00000483851 NEIL1Q96FI4 390 aaPredicted RBP21.56■■□□□ 1.04
SHOX2-204ENST00000483851 BSCL2Q96G97 398 aaPredicted RBP21.56■■□□□ 1.04
SHOX2-204ENST00000483851 ADTRPQ96IZ2 230 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 USF3Q68DE3 2245 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 A0A1W2PPH5 198 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 LINC00473A8K010 186 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 C17orf98A8MV24 154 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 MMP23AO75900 390 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 F12P00748 615 aaPredicted RBP21.56■■□□□ 1.04
SHOX2-204ENST00000483851 DLX6P56179 175 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 OR8B3Q8NGG8 313 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 OR8B2Q96RD0 313 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 MMP26Q9NRE1 261 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 RCL1Q9Y2P8 373 aaKnown RBP21.56■■□□□ 1.04
SHOX2-204ENST00000483851 PRELID3BQ9Y3B1 194 aa21.56■■□□□ 1.04
SHOX2-204ENST00000483851 SLC31A2O15432 143 aa21.55■■□□□ 1.04
SHOX2-204ENST00000483851 SULT1A2P50226 295 aa21.55■■□□□ 1.04
SHOX2-204ENST00000483851 BRWD1-AS2P59051 145 aa21.55■■□□□ 1.04
SHOX2-204ENST00000483851 ARID1AO14497 2285 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 A0A087X0M5 115 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 A0A0G2JRQ6 117 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 A0A1B0GX30 115 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 M0R1X1 148 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 RAMP3O60896 148 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 C1QL1O75973 258 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 CCL3L1P16619 93 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 TLE4Q04727 773 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 C8orf46Q8TAG6 207 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 C17orf50Q8WW18 174 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 ZNF705EA8MWA4 302 aaPredicted RBP21.54■■□□□ 1.04
SHOX2-204ENST00000483851 PPIHO43447 177 aaKnown RBP21.54■■□□□ 1.04
SHOX2-204ENST00000483851 EFNA4P52798 201 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 ODF3L1Q8IXM7 274 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 ZNF596Q8TC21 504 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 LEAP2Q969E1 77 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 WFDC1Q9HC57 220 aa21.54■■□□□ 1.04
SHOX2-204ENST00000483851 RBP4P02753 201 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 P0C879 139 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 THBS3P49746 956 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 AVPI1Q5T686 147 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 NCR3LG1Q68D85 454 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 IL34Q6ZMJ4 242 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 LINC00311Q8N616 119 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 S1PR3Q99500 378 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 ZNF251Q9BRH9 671 aa21.53■■□□□ 1.04
SHOX2-204ENST00000483851 SAA2-SAA4A0A096LPE2 208 aa21.52■■□□□ 1.04
SHOX2-204ENST00000483851 FAM90A26D6RGX4 464 aa21.52■■□□□ 1.04
SHOX2-204ENST00000483851 HPRT1P00492 218 aa21.52■■□□□ 1.04
SHOX2-204ENST00000483851 SAA2P0DJI9 122 aaPredicted RBP21.52■■□□□ 1.04
SHOX2-204ENST00000483851 ARHGDIBP52566 201 aa21.52■■□□□ 1.04
SHOX2-204ENST00000483851 RPL39P5Q59GN2 51 aa21.52■■□□□ 1.04
SHOX2-204ENST00000483851 CXorf66Q5JRM2 361 aaPredicted RBP21.52■■□□□ 1.04
SHOX2-204ENST00000483851 CACNG5Q9UF02 275 aa21.52■■□□□ 1.04
SHOX2-204ENST00000483851 TMEM218A2RU14 115 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 IGHV3-7P01780 117 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 APOC3P02656 99 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 UTF1Q5T230 341 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 LYG1Q8N1E2 194 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 DDB2Q92466 427 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 SMIM3Q9BZL3 60 aa21.52■■□□□ 1.03
SHOX2-204ENST00000483851 YLPM1P49750 1951 aaKnown RBP21.51■■□□□ 1.03
SHOX2-204ENST00000483851 DOPEY1Q5JWR5 2465 aa21.51■■□□□ 1.03
SHOX2-204ENST00000483851 OVOL3O00110 214 aa21.51■■□□□ 1.03
SHOX2-204ENST00000483851 S1PR2O95136 353 aa21.51■■□□□ 1.03
SHOX2-204ENST00000483851 ZNF816Q0VGE8 651 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-204ENST00000483851 PJVKQ0ZLH3 352 aa21.51■■□□□ 1.03
SHOX2-204ENST00000483851 PXDC1Q5TGL8 231 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms