RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 C1orf122Q6ZSJ8 110 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 FAM219AQ8IW50 185 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 SPAG16Q8N0X2 631 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 KIR3DL3Q8N743 410 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 TCTEX1D1Q8N7M0 179 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 ZNF383Q8NA42 475 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 ZBTB8BQ8NAP8 495 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 TNFRSF14Q92956 283 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 RBPMSQ93062 196 aaKnown RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 GPR146Q96CH1 333 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 RBMXL1Q96E39 390 aaKnown RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 PDCD10Q9BUL8 212 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 NMES1Q9C002 83 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 SIRPDQ9H106 197 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 RANBP3Q9H6Z4 567 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 FAM212BQ9NTI7 297 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 BEX4Q9NWD9 120 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 POLR3KQ9Y2Y1 108 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-226ENST00000483656 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
HDAC6-226ENST00000483656 MED13LQ71F56 2210 aa8.21□□□□□ -1.09
HDAC6-226ENST00000483656 NBPF19A0A087WUL8 3843 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 H0YIZ8 118 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 ENSAO43768 121 aaKnown RBP8.21□□□□□ -1.1
HDAC6-226ENST00000483656 FOXH1O75593 365 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 S1PR2O95136 353 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 IFNA21P01568 189 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 P0C879 139 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 VDAC1P21796 283 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 PRTN3P24158 256 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 COX7A1P24310 79 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 THBS3P49746 956 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 ZNF816Q0VGE8 651 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-226ENST00000483656 IZUMO4Q1ZYL8 232 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 CLEC12BQ2HXU8 276 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 DEFB113Q30KQ7 82 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 LDLRAD2Q5SZI1 272 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 Q6ZRM9 215 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 GRPEL2Q8TAA5 225 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 PPP1R1CQ8WVI7 109 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 HYLS1Q96M11 299 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 RNF126Q9BV68 326 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 MRPL20Q9BYC9 149 aaKnown RBP8.21□□□□□ -1.1
HDAC6-226ENST00000483656 UNKLQ9H9P5 680 aaKnown RBP8.21□□□□□ -1.1
HDAC6-226ENST00000483656 SIRT7Q9NRC8 400 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 BOLA1Q9Y3E2 137 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 ABCA2Q9BZC7 2435 aa8.21□□□□□ -1.1
HDAC6-226ENST00000483656 MAP1AP78559 2803 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-226ENST00000483656 hCG_1809904A0A1W2PP81 198 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PPE2 198 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PR64 198 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PRV1 198 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 LY6LH3BQJ8 138 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 TOR1AO14656 332 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 RBFOX2O43251 390 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC6-226ENST00000483656 FCGR3BO75015 233 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 MPC2O95563 127 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 SLC25A4P12235 298 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 MMP9P14780 707 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 RPA2P15927 270 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 PSMB6P28072 239 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 CYCSP99999 105 aaKnown RBP8.2□□□□□ -1.1
HDAC6-226ENST00000483656 KLRD1Q13241 179 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 RAB32Q13637 225 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 HLA-DRB5Q30154 266 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 FAM71F2Q6NXP2 309 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 KRTAP1-3Q8IUG1 177 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 LRRC75A-AS1Q8N1F1 130 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 PNKDQ8N490 385 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 C9orf62Q8N4C0 152 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 BEND2Q8NDZ0 799 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 OR11H6Q8NGC7 330 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 OR4P4Q8NGL7 312 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 OR4D5Q8NGN0 318 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 OR10X1Q8NGY0 326 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 LSM10Q969L4 123 aaKnown RBP8.2□□□□□ -1.1
HDAC6-226ENST00000483656 MBD6Q96DN6 1003 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 TBX15Q96SF7 602 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 S1PR3Q99500 378 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 GSKIPQ9P0R6 139 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 KPTNQ9Y664 436 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 VPS13CQ709C8 3753 aa8.2□□□□□ -1.1
HDAC6-226ENST00000483656 ODF3BA8MYP8 253 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 RNASEK-C17orf49H0YIS7 233 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 PITX3O75364 302 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 MBPP02686 304 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-226ENST00000483656 LYL1P12980 280 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 SLC25A16P16260 332 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 CXCL2P19875 107 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 G6PCP35575 357 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 REG1BP48304 166 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 DVL1P1P54792 670 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-226ENST00000483656 PRRX1P54821 245 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 LGALSLQ3ZCW2 172 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-226ENST00000483656 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 C11orf87Q6NUJ2 197 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 OR13D1Q8NGV5 346 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms