RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 C15orf40Q8WUR7 153 aa7.65□□□□□ -1.18
HMG20B-210ENST00000483417 SECTM1Q8WVN6 248 aa7.65□□□□□ -1.18
HMG20B-210ENST00000483417 EDARADDQ8WWZ3 215 aa7.65□□□□□ -1.18
HMG20B-210ENST00000483417 RANBP3Q9H6Z4 567 aaPredicted RBP7.65□□□□□ -1.18
HMG20B-210ENST00000483417 PLSCR3Q9NRY6 295 aa7.65□□□□□ -1.18
HMG20B-210ENST00000483417 PIPOXQ9P0Z9 390 aa7.65□□□□□ -1.18
HMG20B-210ENST00000483417 ZNF221Q9UK13 617 aa7.65□□□□□ -1.18
HMG20B-210ENST00000483417 AMMECR1Q9Y4X0 333 aaPredicted RBP7.65□□□□□ -1.18
HMG20B-210ENST00000483417 RBM7Q9Y580 266 aaKnown RBP7.65□□□□□ -1.18
HMG20B-210ENST00000483417 PLA2G10O15496 165 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 TNFSF12O43508 249 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 TSPAN15O95858 294 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 IGKV1D-33P01593 117 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 IGKV1-33P01594 117 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 AMY1AP04745 511 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 AMY2AP04746 511 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 PI3P19957 117 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 PTBP1P26599 531 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMG20B-210ENST00000483417 RAB7AP51149 207 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 TAS2R46P59540 309 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 TAS2R19P59542 299 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 TSPAN5P62079 268 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 MRPS10P82664 201 aaKnown RBP7.64□□□□□ -1.19
HMG20B-210ENST00000483417 DEFA6Q01524 100 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 ZNF45Q02386 682 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 EBI3Q14213 229 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 HABP2Q14520 560 aaPredicted RBP7.64□□□□□ -1.19
HMG20B-210ENST00000483417 VAX1Q5SQQ9 334 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 C11orf88Q6PI97 169 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 LIAT1Q6ZQX7 453 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 ZNF818PQ6ZRF7 136 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 LHFPL1Q86WI0 220 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 THNSL2Q86YJ6 484 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 OR6F1Q8NGZ6 308 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 WIPF2Q8TF74 440 aaPredicted RBP7.64□□□□□ -1.19
HMG20B-210ENST00000483417 MOB3AQ96BX8 217 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 EAF1Q96JC9 268 aaPredicted RBP7.64□□□□□ -1.19
HMG20B-210ENST00000483417 SLC5A7Q9GZV3 580 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 HRASLSQ9HDD0 168 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 SERTAD4Q9NUC0 356 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 RABL2AQ9UBK7 228 aaPredicted RBP7.64□□□□□ -1.19
HMG20B-210ENST00000483417 RABL2BQ9UNT1 228 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 TCF19Q9Y242 345 aa7.64□□□□□ -1.19
HMG20B-210ENST00000483417 LINC01548A6NM66 108 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 SRRM4A7MD48 611 aaKnown RBP7.63□□□□□ -1.19
HMG20B-210ENST00000483417 OOSP1A8MZH6 123 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 H0YJW9 148 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 PEX14O75381 377 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 PGLYRP1O75594 196 aaPredicted RBP7.63□□□□□ -1.19
HMG20B-210ENST00000483417 IL3RAP26951 378 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 CD1BP29016 333 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 DUTP33316 252 aaKnown RBP7.63□□□□□ -1.19
HMG20B-210ENST00000483417 SSBP1Q04837 148 aaKnown RBP7.63□□□□□ -1.19
HMG20B-210ENST00000483417 LSAMPQ13449 338 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 RNASE10Q5GAN6 216 aaKnown RBP7.63□□□□□ -1.19
HMG20B-210ENST00000483417 TMEM17Q86X19 198 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 OR8H3Q8N146 312 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 Q8N6K4 173 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 ZNF645Q8N7E2 425 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 GDPD1Q8N9F7 314 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 OR5AN1Q8NGI8 311 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 OR51S1Q8NGJ8 323 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 OR13C8Q8NGS7 320 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 TERB2Q8NHR7 220 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 DDB2Q92466 427 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 S1PR3Q99500 378 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 FXYD6Q9H0Q3 95 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 ZNF702PQ9H963 129 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 RAB18Q9NP72 206 aa7.63□□□□□ -1.19
HMG20B-210ENST00000483417 IGKV1-16P04430 117 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 IFNA6P05013 189 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 CSF1P09603 554 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 AKAIN1P0CW23 69 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 IL7P13232 177 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 BRS3P32247 399 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 PPP5CP53041 499 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 ACTBP60709 375 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 HES1Q14469 280 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 SCGB2B2Q4G0G5 96 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 PHLDA2Q53GA4 152 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 PDLIM3Q53GG5 364 aaPredicted RBP7.62□□□□□ -1.19
HMG20B-210ENST00000483417 OR2B11Q5JQS5 317 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 CCDC144NLQ6NUI1 221 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 TOMM5Q8N4H5 51 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 BVESQ8NE79 360 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 OR4C13Q8NGP0 309 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 OR2T6Q8NHC8 308 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 MARCH1Q8TCQ1 289 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 RBM14Q96PK6 669 aaKnown RBP7.62□□□□□ -1.19
HMG20B-210ENST00000483417 RTBDNQ9BSG5 229 aaPredicted RBP7.62□□□□□ -1.19
HMG20B-210ENST00000483417 RSRP1Q9BUV0 290 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 NPFFR1Q9GZQ6 430 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 WNT10AQ9GZT5 417 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 ABCB10Q9NRK6 738 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 TAS2R8Q9NYW2 309 aa7.62□□□□□ -1.19
HMG20B-210ENST00000483417 FCN1O00602 326 aa7.61□□□□□ -1.19
HMG20B-210ENST00000483417 MOSP00540 346 aa7.61□□□□□ -1.19
HMG20B-210ENST00000483417 FAM106CPP0CH98 169 aa7.61□□□□□ -1.19
HMG20B-210ENST00000483417 TMEM11P17152 192 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms