RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SLA2Q9H6Q3 261 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 MRPS18AQ9NVS2 196 aaKnown RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 RPL36Q9Y3U8 105 aaKnown RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 DMRT1Q9Y5R6 373 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 STARD9Q9P2P6 4700 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 C13orf42A0A1B0GVH6 325 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 A0A1W2PPK0 400 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 IZUMO1RA6ND01 250 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 FAM90A7PA6NKC0 464 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 FAM90A23PA8MXZ1 464 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 HSBP1L1C9JCN9 74 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 H0YJW9 148 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 RAB29O14966 203 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 OGG1O15527 345 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 PDCD6O75340 191 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 GPX5O75715 221 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 ATP5HO75947 161 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 TFAP2AP05549 437 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 MGMTP16455 207 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 MC5RP33032 325 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 HTR2BP41595 481 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 PCP4P48539 62 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 SYNJ2BPP57105 145 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 RAB14P61106 215 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 XP32Q5T750 250 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 DMKNQ6E0U4 476 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-206ENST00000483030 AWAT2Q6E213 333 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 TMPRSS11AQ6ZMR5 421 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF680Q8NEM1 530 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 OR9G4Q8NGQ1 327 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 IL1F10Q8WWZ1 152 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 FAM46BQ96A09 425 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 LYSTQ99698 3801 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 THAP7Q9BT49 309 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-206ENST00000483030 BABAM2Q9NXR7 383 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 PIPOXQ9P0Z9 390 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 METTL1Q9UBP6 276 aaKnown RBP5.62□□□□□ -1.51
CSDE1-206ENST00000483030 CKLFQ9UBR5 152 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 STEAP1Q9UHE8 339 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 LRRC42Q9Y546 428 aa5.62□□□□□ -1.51
CSDE1-206ENST00000483030 A0A0G2JLM5 398 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 TRBV5-5A0A0J9YX44 114 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 OR5H14A6NHG9 310 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 RBBP9O75884 186 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 LALBAP00709 142 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 CA2P00918 260 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 CSN3P07498 182 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 RPS11P62280 158 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSDE1-206ENST00000483030 FXYD3Q14802 87 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 PSG5Q15238 335 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 HMGN3Q15651 99 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 SMN1Q16637 294 aaKnown RBP5.61□□□□□ -1.51
CSDE1-206ENST00000483030 Q499Y3 187 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 LCN12Q6JVE5 192 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 FAM71F2Q6NXP2 309 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 LINC00322Q6ZN03 302 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-206ENST00000483030 CBR4Q8N4T8 237 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 ZFP41Q8N8Y5 198 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 POC5Q8NA72 575 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 OR5AN1Q8NGI8 311 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 GRPEL2Q8TAA5 225 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 PYDC1Q8WXC3 89 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 SMIM19Q96E16 107 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 ABHD14BQ96IU4 210 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 Q96M66 194 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 OR14A2Q96R54 314 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 RNF5Q99942 180 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 SULT4A1Q9BR01 284 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 FAAP24Q9BTP7 215 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 PARP12Q9H0J9 701 aaKnown RBP5.61□□□□□ -1.51
CSDE1-206ENST00000483030 PLEKHA3Q9HB20 300 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 FGF20Q9NP95 211 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-206ENST00000483030 ABRACLQ9P1F3 81 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 SLC23A1Q9UHI7 598 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 WASHC3Q9Y3C0 194 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 CEPT1Q9Y6K0 416 aa5.61□□□□□ -1.51
CSDE1-206ENST00000483030 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 TRBV5-7A0A0A0MS05 114 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 LOC100130705A0A1B0GUX0 176 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 SHISA3A0PJX4 238 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 RBMY1BA6NDE4 496 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 RBMY1EA6NEQ0 496 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 SLC22A1O15245 554 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 GATCO43716 136 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 PROP1O75360 226 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 CNIH1O95406 144 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 BRI3O95415 125 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 TRBV12-3P01733 135 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 IGKV1-16P04430 117 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 RBMY1DP0C7P1 496 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 DCKP27707 260 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 CAPGP40121 348 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 RASSF2P50749 326 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 LINC00205P59089 165 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 RPS16P62249 146 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 DYRK1AQ13627 763 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 TATDN3Q17R31 274 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 MOGAT2Q3SYC2 334 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms