RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
VAMP4-204ENST00000482519 RNF5Q99942 180 aa12.97□□□□□ -0.33
VAMP4-204ENST00000482519 DCSTAMPQ9H295 470 aa12.97□□□□□ -0.33
VAMP4-204ENST00000482519 DIABLOQ9NR28 239 aa12.97□□□□□ -0.33
VAMP4-204ENST00000482519 TGP01266 2768 aa12.97□□□□□ -0.33
VAMP4-204ENST00000482519 NFYAP23511 347 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-204ENST00000482519 CX3CL1P78423 397 aa12.96□□□□□ -0.33
VAMP4-204ENST00000482519 DEFB136Q30KP8 78 aa12.96□□□□□ -0.33
VAMP4-204ENST00000482519 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-204ENST00000482519 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
VAMP4-204ENST00000482519 CROCCP3Q8IVE0 287 aa12.96□□□□□ -0.33
VAMP4-204ENST00000482519 LINC00482Q8N8I6 264 aa12.96□□□□□ -0.33
VAMP4-204ENST00000482519 CCL24O00175 119 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 SLC25A17O43808 307 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 FCER2P06734 321 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 CTXN2P0C2S0 81 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 SLC6A1P30531 599 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 MYCNOSP40205 109 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 NDPQ00604 133 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 CBX3Q13185 183 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 ZNF660Q6AZW8 331 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-204ENST00000482519 BVESQ8NE79 360 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
VAMP4-204ENST00000482519 RAX2Q96IS3 184 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 ANXA10Q9UJ72 324 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 ZNF580Q9UK33 172 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 GAB2Q9UQC2 676 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 FBXO7Q9Y3I1 522 aa12.95□□□□□ -0.34
VAMP4-204ENST00000482519 CA2P00918 260 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 PSMB8P28062 276 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 PPIFP30405 207 aaKnown RBP12.94□□□□□ -0.34
VAMP4-204ENST00000482519 CDX1P47902 265 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-204ENST00000482519 LUMP51884 338 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-204ENST00000482519 ARPC4P59998 168 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 GNB1P62873 340 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 RTL8BQ17RB0 113 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 CNIH2Q6PI25 160 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 PPP1R27Q86WC6 154 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 RNF152Q8N8N0 203 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 CASTOR1Q8WTX7 329 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 OR5B12Q96R08 314 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 FAM103A1Q9BTL3 118 aaKnown RBP12.94□□□□□ -0.34
VAMP4-204ENST00000482519 FUNDC2Q9BWH2 189 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 TPSG1Q9NRR2 321 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 NECAP2Q9NVZ3 263 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 OR2W1Q9Y3N9 320 aa12.94□□□□□ -0.34
VAMP4-204ENST00000482519 A0A0A6YYH2 397 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 A0A1W2PN81 502 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 A6NJ64 397 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 SHOXO15266 292 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 TUSC2O75896 110 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 CNIH1O95406 144 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 PTHLHP12272 177 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 CHRNA7P36544 502 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 NCS1P62166 190 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 GVQW1Q8N7I0 195 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 SAMD12Q8N8I0 201 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 S100A16Q96FQ6 103 aaKnown RBP12.93□□□□□ -0.34
VAMP4-204ENST00000482519 HARBI1Q96MB7 349 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 P2RX4Q99571 388 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 AUNIPQ9H7T9 357 aa12.93□□□□□ -0.34
VAMP4-204ENST00000482519 MEIS3P1A6NDR6 274 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 TMEM127O75204 238 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 SPDEFO95238 335 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 IGLV1-40P01703 118 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 LGALS7P47929 136 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 RAB9AP51151 201 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 VBP1P61758 197 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 TAGLNQ01995 201 aaKnown RBP12.92□□□□□ -0.34
VAMP4-204ENST00000482519 TMEM267Q0VDI3 215 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-204ENST00000482519 FXYD3Q14802 87 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 UBE2NLQ5JXB2 153 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 UNQ5815/PRO19632Q6UWF5 114 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 ZNF562Q6V9R5 426 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 ZNF645Q8N7E2 425 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 MINDY2Q8NBR6 621 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 GRPEL2Q8TAA5 225 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 C4orf3Q8WVX3 66 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 ADTRPQ96IZ2 230 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 DCUN1D5Q9BTE7 237 aa12.92□□□□□ -0.34
VAMP4-204ENST00000482519 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-204ENST00000482519 IGKV1D-13A0A0B4J2D9 117 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 TRIM64CA6NLI5 447 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 LINC00473A8K010 186 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
VAMP4-204ENST00000482519 CRYZL1O95825 349 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 IGKV1-13P0DP09 117 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 RRASP10301 218 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 EGR2P11161 476 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-204ENST00000482519 HOXD3P31249 432 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-204ENST00000482519 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
VAMP4-204ENST00000482519 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 ACTBL2Q562R1 376 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 OR2B11Q5JQS5 317 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 REC114Q7Z4M0 266 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms