RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 TRIQKQ629K1 86 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 FAAP20Q6NZ36 180 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 ZNF66Q6ZN08 573 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 ZNF818PQ6ZRF7 136 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 ZNF383Q8NA42 475 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 DRAXINQ8NBI3 349 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 BVESQ8NE79 360 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 OR2T10Q8NGZ9 312 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 ADTRPQ96IZ2 230 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 RBM14Q96PK6 669 aaKnown RBP9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 HSD17B10Q99714 261 aaKnown RBP9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 RSRP1Q9BUV0 290 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 TNFRSF19Q9NS68 423 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 SLC2A8Q9NY64 477 aa9.91□□□□□ -0.82
SHROOM3-205ENST00000481002 LINC00473A8K010 186 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 GPR137BO60478 399 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 MOSP00540 346 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 INPP1P49441 399 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 RIPPLY3P57055 190 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 RPL15P61313 204 aaKnown RBP9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 SCGB2B2Q4G0G5 96 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 ZNF57Q68EA5 555 aaPredicted RBP9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 GLDNQ6ZMI3 551 aaPredicted RBP9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 C16orf82Q7Z2V1 217 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 Q8N6K4 173 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 OR51S1Q8NGJ8 323 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 DDB2Q92466 427 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 MRGPRFQ96AM1 343 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 EAF1Q96JC9 268 aaPredicted RBP9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 PRRT1Q99946 306 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 RAB18Q9NP72 206 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 SCP2D1Q9UJQ7 156 aa9.9□□□□□ -0.82
SHROOM3-205ENST00000481002 GPR31O00270 319 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 CHST1O43916 411 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 OR2F2O95006 317 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 APOA2P02652 100 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 RRASP10301 218 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 ECI1P42126 302 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 RPL30P62888 115 aaKnown RBP9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 SRSF2Q01130 221 aaKnown RBP9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 HES1Q14469 280 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 TMEM219Q86XT9 240 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 SLC38A6Q8IZM9 456 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 OR13C8Q8NGS7 320 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 ZNF486Q96H40 463 aaPredicted RBP9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 RNF5Q99942 180 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 MCUBQ9NWR8 336 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
SHROOM3-205ENST00000481002 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 NAP1L6A6NFF2 107 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 PGLYRP1O75594 196 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 TMEM11P17152 192 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 HNF4GQ14541 408 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 SURF2Q15527 256 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 KCTD9Q7L273 389 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 CMTM1Q8IZ96 169 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 OR8H1Q8NGG4 311 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 ZFAND1Q8TCF1 268 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 MARCH1Q8TCQ1 289 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 RBMXL1Q96E39 390 aaKnown RBP9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 RITA1Q96K30 269 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 GPHA2Q96T91 129 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 C7orf50Q9BRJ6 194 aaKnown RBP9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 SLC25A33Q9BSK2 321 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 PLSCR3Q9NRY6 295 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 SLC35D1Q9NTN3 355 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 GPR132Q9UNW8 380 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 PRELID3BQ9Y3B1 194 aa9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 FBN1P35555 2871 aaKnown RBP9.88□□□□□ -0.83
SHROOM3-205ENST00000481002 H7C2Y5 167 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 M0QZK8 103 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 PLA2G10O15496 165 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 PLXNB1O43157 2135 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 FGF16O43320 207 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 TNFSF12O43508 249 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 UPK1BO75841 260 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 IGKV1-16P04430 117 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 CTSDP07339 412 aaPredicted RBP9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 PGAM2P15259 253 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 S100GP29377 79 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 F2RL1P55085 397 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 RND3P61587 244 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 RTL8BQ17RB0 113 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 TMEM177Q53S58 311 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 DHRS7BQ6IAN0 325 aaPredicted RBP9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 IDO2Q6ZQW0 420 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 OR4C13Q8NGP0 309 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 FLYWCH2Q96CP2 140 aaKnown RBP9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 SCGB3A2Q96PL1 93 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 C1RLQ9NZP8 487 aa9.87□□□□□ -0.83
SHROOM3-205ENST00000481002 CENPXA8MT69 81 aa9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 RBFOX2O43251 390 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 AMY1AP04745 511 aa9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 CRYBA1P05813 215 aa9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 KIR2DS2P43631 304 aa9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 LGALS7P47929 136 aa9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 CATR1Q13166 79 aa9.86□□□□□ -0.83
SHROOM3-205ENST00000481002 PHLDA2Q53GA4 152 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms