RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 LINC01548A6NM66 108 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 M0QYG6 137 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 FGF16O43320 207 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 IGKV1-16P04430 117 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 DYRK1AQ13627 763 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 GIMAP1Q8WWP7 306 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 RASL11BQ9BPW5 248 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 ZNF2Q9BSG1 426 aaPredicted RBP16.14■□□□□ 0.17
CTSA-206ENST00000480961 SLC5A7Q9GZV3 580 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 MMP27Q9H306 513 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 SLC35D1Q9NTN3 355 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 NDUFA13Q9P0J0 144 aa16.14■□□□□ 0.17
CTSA-206ENST00000480961 FABP12A6NFH5 140 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 LINC00473A8K010 186 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 RBBP9O75884 186 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 TPPPO94811 219 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 APOA2P02652 100 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 DUTP33316 252 aaKnown RBP16.13■□□□□ 0.17
CTSA-206ENST00000480961 THBS3P49746 956 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 RPL30P62888 115 aaKnown RBP16.13■□□□□ 0.17
CTSA-206ENST00000480961 PYHIN1Q6K0P9 492 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 TMEM17Q86X19 198 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 BVESQ8NE79 360 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 OR8H1Q8NGG4 311 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 C15orf40Q8WUR7 153 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 MTFP1Q9UDX5 166 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 LINC00527Q9UJ94 153 aa16.13■□□□□ 0.17
CTSA-206ENST00000480961 RBMX2Q9Y388 322 aaKnown RBP16.13■□□□□ 0.17
CTSA-206ENST00000480961 GABARAPH6UMI1 98 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 NBR2O15453 112 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 TNFSF12O43508 249 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 HERV-K104P61576 105 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 RPS16P62249 146 aaKnown RBP16.12■□□□□ 0.17
CTSA-206ENST00000480961 OR2B11Q5JQS5 317 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 ZNF660Q6AZW8 331 aaPredicted RBP16.12■□□□□ 0.17
CTSA-206ENST00000480961 SHISA2Q6UWI4 295 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 DHRS11Q6UWP2 260 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 FAM71E2Q8N5Q1 922 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 FBXL15Q9H469 300 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 TAS2R8Q9NYW2 309 aa16.12■□□□□ 0.17
CTSA-206ENST00000480961 CD3DP04234 171 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 TSPAN5P62079 268 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 PDPNQ86YL7 162 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 OR6F1Q8NGZ6 308 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 NOL4LQ96MY1 436 aaPredicted RBP16.11■□□□□ 0.17
CTSA-206ENST00000480961 SOSTQ9BQB4 213 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 HSPB9Q9BQS6 159 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 TINAGL1Q9GZM7 467 aaPredicted RBP16.11■□□□□ 0.17
CTSA-206ENST00000480961 WNT10AQ9GZT5 417 aa16.11■□□□□ 0.17
CTSA-206ENST00000480961 LIN7CQ9NUP9 197 aaKnown RBP16.11■□□□□ 0.17
CTSA-206ENST00000480961 SLC22A5O76082 557 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 C5orf64Q2M2E5 130 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 C10orf99Q6UWK7 81 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 SLC35E3Q7Z769 313 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 NPBQ8NG41 125 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 DDB2Q92466 427 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 FLYWCH2Q96CP2 140 aaKnown RBP16.1■□□□□ 0.17
CTSA-206ENST00000480961 CLCC1Q96S66 551 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 CITED1Q99966 193 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 KIAA1456Q9P272 454 aa16.1■□□□□ 0.17
CTSA-206ENST00000480961 S100A5P33763 92 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 EIF4EBP1Q13541 118 aaPredicted RBP16.09■□□□□ 0.17
CTSA-206ENST00000480961 PSG5Q15238 335 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 ZNF818PQ6ZRF7 136 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 CENPVQ7Z7K6 275 aaPredicted RBP16.09■□□□□ 0.17
CTSA-206ENST00000480961 OR4D10Q8NGI6 311 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 SMIM4Q8WVI0 70 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 TCTEX1D2Q8WW35 142 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 MOB3AQ96BX8 217 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 ADTRPQ96IZ2 230 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 FXYD6Q9H0Q3 95 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 ZNF107Q9UII5 783 aaPredicted RBP16.09■□□□□ 0.17
CTSA-206ENST00000480961 A3GALT2U3KPV4 340 aa16.09■□□□□ 0.17
CTSA-206ENST00000480961 FCN1O00602 326 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 RRHO14718 337 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 CTDSPLO15194 276 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 FCGR3BO75015 233 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 NDUFA3O95167 84 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 CRYZL1O95825 349 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 IGHG2P01859 326 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 CD28P10747 220 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 GNRHRP30968 328 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 MRPS10P82664 201 aaKnown RBP16.08■□□□□ 0.16
CTSA-206ENST00000480961 PLGLAQ15195 96 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 RTL8BQ17RB0 113 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 LIN54Q6MZP7 749 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 KCTD9Q7L273 389 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 MFSD4AQ8N468 514 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 TMEM229BQ8NBD8 167 aa16.08■□□□□ 0.16
CTSA-206ENST00000480961 METTL1Q9UBP6 276 aaKnown RBP16.08■□□□□ 0.16
CTSA-206ENST00000480961 SRRM4A7MD48 611 aaKnown RBP16.07■□□□□ 0.16
CTSA-206ENST00000480961 IFNA6P05013 189 aa16.07■□□□□ 0.16
CTSA-206ENST00000480961 ACTBL2Q562R1 376 aa16.07■□□□□ 0.16
CTSA-206ENST00000480961 PYDC2Q56P42 97 aa16.07■□□□□ 0.16
CTSA-206ENST00000480961 RNASE10Q5GAN6 216 aaKnown RBP16.07■□□□□ 0.16
CTSA-206ENST00000480961 VAX1Q5SQQ9 334 aa16.07■□□□□ 0.16
CTSA-206ENST00000480961 ZNF329Q86UD4 541 aa16.07■□□□□ 0.16
CTSA-206ENST00000480961 HARBI1Q96MB7 349 aa16.07■□□□□ 0.16
CTSA-206ENST00000480961 TSNAXQ99598 290 aaKnown RBP16.07■□□□□ 0.16
CTSA-206ENST00000480961 RNF5Q99942 180 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms