RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 SDCBPO00560 298 aaPredicted RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 UBE2CO00762 179 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 ARG1P05089 322 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 EIF4EP06730 217 aaKnown RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 NFYBP25208 207 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 HTR1DP28221 377 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 RAB5CP51148 216 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 RAB7AP51149 207 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 LOXL3P58215 753 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 DEFA5Q01523 94 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 MORN2Q502X0 79 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 HCP5Q6MZN7 132 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 CCDC144NLQ6NUI1 221 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 Q71RC1 249 aaPredicted RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 HOGA1Q86XE5 327 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 TMEM86BQ8N661 226 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 RFESDQ8TAC1 157 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 ALX4Q9H161 411 aaPredicted RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 TMPRSS5Q9H3S3 457 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 ZMAT3Q9HA38 289 aaKnown RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 GSN-AS1Q9NRJ2 163 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 DPM3Q9P2X0 92 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 GNG12Q9UBI6 72 aa6.73□□□□□ -1.33
USP54-212ENST00000480210 ZNF107Q9UII5 783 aaPredicted RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 CARHSP1Q9Y2V2 147 aaKnown RBP6.73□□□□□ -1.33
USP54-212ENST00000480210 HSPA12AO43301 675 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 TXNL1O43396 289 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 RBBP9O75884 186 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 OR2F2O95006 317 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 RLN2P04090 185 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 IGHV4-38-2P0DP08 117 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 OMGP23515 440 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 SSTR5P35346 364 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 ACTBP60709 375 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 RAB2AP61019 212 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 ACTG1P63261 375 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 OR2F1Q13607 317 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 HLA-DRB5Q30154 266 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 PRAMEF5Q5TYX0 476 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 OLFML2AQ68BL7 652 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 EIF5AL1Q6IS14 154 aaKnown RBP6.72□□□□□ -1.33
USP54-212ENST00000480210 FAM71F2Q6NXP2 309 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 GLDNQ6ZMI3 551 aaPredicted RBP6.72□□□□□ -1.33
USP54-212ENST00000480210 IL34Q6ZMJ4 242 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 TMUB2Q71RG4 321 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 OR11H4Q8NGC9 324 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 OR10J5Q8NHC4 309 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 GPX8Q8TED1 209 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 CABLES2Q9BTV7 478 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 ST6GALNAC5Q9BVH7 336 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 SEC11CQ9BY50 192 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 TUBA4BQ9H853 241 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 PIPOXQ9P0Z9 390 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 ZNF69Q9UC07 566 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 ANXA10Q9UJ72 324 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 PSG11Q9UQ72 335 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 GAB2Q9UQC2 676 aa6.72□□□□□ -1.33
USP54-212ENST00000480210 FN1P02751 2386 aaKnown RBP6.71□□□□□ -1.34
USP54-212ENST00000480210 TRBV6-7A0A0A0MS04 114 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 TRAV39A0A0B4J263 110 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 KANTRA0A1W2PQU2 76 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 BUB1B-PAK6H3BSN5 160 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 GABARAPH6UMI1 98 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 MMP23AO75900 390 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 SCTP09683 121 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 VAMP1P23763 118 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 COX7A1P24310 79 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 BRS3P32247 399 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 CEACAM6P40199 344 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 DYNLT3P51808 116 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 TAS2R46P59540 309 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 MADCAM1Q13477 382 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 ACTBL2Q562R1 376 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 Q6YL49 198 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 SLC25A48Q6ZT89 311 aaKnown RBP6.71□□□□□ -1.34
USP54-212ENST00000480210 LDLRAD3Q86YD5 345 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 PRR18Q8N4B5 295 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 OR2AK2Q8NG84 335 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 OR5AP2Q8NGF4 316 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 OR10X1Q8NGY0 326 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 OR5R1Q8NH85 324 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 OR1S1Q8NH92 325 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 OR1L1Q8NH94 360 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 COQ8AQ8NI60 647 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 THAP6Q8TBB0 222 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 NUDCD2Q8WVJ2 157 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 FCAMRQ8WWV6 532 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 IL1F10Q8WWZ1 152 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 HDHD3Q9BSH5 251 aaPredicted RBP6.71□□□□□ -1.34
USP54-212ENST00000480210 C20orf85Q9H1P6 137 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 SMCO4Q9NRQ5 59 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 NECAP2Q9NVZ3 263 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 ANAPC10Q9UM13 185 aa6.71□□□□□ -1.34
USP54-212ENST00000480210 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.34
USP54-212ENST00000480210 BTBD17A6NE02 478 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 CLDN34H7C241 214 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 RAB29O14966 203 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms