RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RNASE10Q5GAN6 216 aaKnown RBP15.73■□□□□ 0.11
LIME1-205ENST00000480139 C11orf88Q6PI97 169 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 GLDNQ6ZMI3 551 aaPredicted RBP15.73■□□□□ 0.11
LIME1-205ENST00000480139 LINC00299Q6ZSB3 139 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 PDPNQ86YL7 162 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 ARRDC1Q8N5I2 433 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 DRAXINQ8NBI3 349 aaPredicted RBP15.73■□□□□ 0.11
LIME1-205ENST00000480139 ZBTB34Q8NCN2 500 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 LINC01006Q8NI28 216 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 TAF15Q92804 592 aaKnown RBP eCLIP15.73■□□□□ 0.11
LIME1-205ENST00000480139 RNF5Q99942 180 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 PRSS22Q9GZN4 317 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 ZNF702PQ9H963 129 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 CLPSL1A2RUU4 121 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 J3QRK9 145 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 TSPAN5P62079 268 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 EIF4EBP1Q13541 118 aaPredicted RBP15.72■□□□□ 0.11
LIME1-205ENST00000480139 CNPY1Q3B7I2 92 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 AWAT1Q58HT5 328 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 C5orf56Q8N8D9 126 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 SECTM1Q8WVN6 248 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 DDB2Q92466 427 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 HSD17B10Q99714 261 aaKnown RBP15.72■□□□□ 0.11
LIME1-205ENST00000480139 SLC5A7Q9GZV3 580 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 PLSCR3Q9NRY6 295 aa15.72■□□□□ 0.11
LIME1-205ENST00000480139 M0QYG6 137 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 RRASP10301 218 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 MDKP21741 143 aaPredicted RBP15.71■□□□□ 0.11
LIME1-205ENST00000480139 FXYD4P59646 89 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 BLCAPP62952 87 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 MEF2DQ14814 521 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 STEAP1BQ6NZ63 245 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 TMEM17Q86X19 198 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 OR2T6Q8NHC8 308 aa15.71■□□□□ 0.11
LIME1-205ENST00000480139 ANKRD20A5PA0PJZ0 165 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 H7C2Y5 167 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 RAB3DO95716 219 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 IFNA6P05013 189 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 LINC00205P59089 165 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 RTL8BQ17RB0 113 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 PYDC2Q56P42 97 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 ZNF66Q6ZN08 573 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 Q8N402 240 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 FAM71E2Q8N5Q1 922 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 Q8N9W7 124 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 NPBQ8NG41 125 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 SPATA3Q8NHX4 192 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 THAP7Q9BT49 309 aaPredicted RBP15.7■□□□□ 0.1
LIME1-205ENST00000480139 TINAGL1Q9GZM7 467 aaPredicted RBP15.7■□□□□ 0.1
LIME1-205ENST00000480139 FXYD6Q9H0Q3 95 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 CCL28Q9NRJ3 127 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 SLC35D1Q9NTN3 355 aa15.7■□□□□ 0.1
LIME1-205ENST00000480139 LIN7CQ9NUP9 197 aaKnown RBP15.7■□□□□ 0.1
LIME1-205ENST00000480139 NCBP2LA6PVI3 153 aaKnown RBP15.69■□□□□ 0.1
LIME1-205ENST00000480139 LINC00473A8K010 186 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 NDUFA3O95167 84 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 AKAIN1P0CW23 69 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 UCP3P55916 312 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 CBX3Q13185 183 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 MMDQ15546 238 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 ABCA11PQ4W5N1 156 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 LPCAT3Q6P1A2 487 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 ZNF818PQ6ZRF7 136 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 KCTD9Q7L273 389 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 LHFPL1Q86WI0 220 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 BVESQ8NE79 360 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 TRIM63Q969Q1 353 aa15.69■□□□□ 0.1
LIME1-205ENST00000480139 TENM1Q9UKZ4 2725 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 NBR2O15453 112 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 SPDEFO95238 335 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 IGKV1-16P04430 117 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 GNRHRP30968 328 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 F2RL1P55085 397 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 PROK1P58294 105 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 AADACL3Q5VUY0 350 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 OR4D10Q8NGI6 311 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 DEDD2Q8WXF8 326 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 FLYWCH2Q96CP2 140 aaKnown RBP15.68■□□□□ 0.1
LIME1-205ENST00000480139 RITA1Q96K30 269 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 SRRQ9GZT4 340 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 PTTG2Q9NZH5 202 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 PRELID3BQ9Y3B1 194 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 RNF114Q9Y508 228 aa15.68■□□□□ 0.1
LIME1-205ENST00000480139 STAB1Q9NY15 2570 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 ZNF45Q02386 682 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 TMEM177Q53S58 311 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 C12orf54Q6X4T0 127 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 Q6ZS46 218 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 MFSD4AQ8N468 514 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 GDPD1Q8N9F7 314 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 RBMXL1Q96E39 390 aaKnown RBP15.67■□□□□ 0.1
LIME1-205ENST00000480139 TSNAXQ99598 290 aaKnown RBP15.67■□□□□ 0.1
LIME1-205ENST00000480139 RASL11BQ9BPW5 248 aa15.67■□□□□ 0.1
LIME1-205ENST00000480139 ZNF735P0CB33 412 aa15.66■□□□□ 0.1
LIME1-205ENST00000480139 LGALS7P47929 136 aa15.66■□□□□ 0.1
LIME1-205ENST00000480139 AP3S2P59780 193 aa15.66■□□□□ 0.1
LIME1-205ENST00000480139 RPL30P62888 115 aaKnown RBP15.66■□□□□ 0.1
LIME1-205ENST00000480139 CATR1Q13166 79 aa15.66■□□□□ 0.1
LIME1-205ENST00000480139 CMTM1Q8IZ96 169 aa15.66■□□□□ 0.1
LIME1-205ENST00000480139 SLC38A6Q8IZM9 456 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms