RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CHPT1Q8WUD6 406 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 CAPSLQ8WWF8 208 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 BORCS5Q969J3 196 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 PHF21AQ96BD5 680 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 YIPF6Q96EC8 236 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 ADTRPQ96IZ2 230 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 S1PR3Q99500 378 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 NICN1Q9BSH3 213 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 SLC25A33Q9BSK2 321 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 FAAP24Q9BTP7 215 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 PECRQ9BY49 303 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF581Q9P0T4 197 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF107Q9UII5 783 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-213ENST00000480102 A0A1W2PRD5 423 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 A0A1W2PRF3 423 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 A0A1W2PRM7 423 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 M0QYG6 137 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 AP4M1O00189 453 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 SULT1C2O00338 296 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 FABP7O15540 132 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 RBFOX2O43251 390 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTCD3-213ENST00000480102 XRCC3O43542 346 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 AIREO43918 545 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 APOA1P02647 267 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 CD3GP09693 182 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 NFYBP25208 207 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 SDC2P34741 201 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 ALDH3B2P48448 385 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 VEGFCP49767 419 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 LUMP51884 338 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-213ENST00000480102 SNU13P55769 128 aaKnown RBP3.87□□□□□ -1.79
PTCD3-213ENST00000480102 CFHR3Q02985 330 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 KLK9Q2XQG4 91 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF260Q3ZCT1 412 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 KPRPQ5T749 579 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF660Q6AZW8 331 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-213ENST00000480102 OR10K2Q6IF99 312 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 CNIH2Q6PI25 160 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 PDPNQ86YL7 162 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 FOXRED2Q8IWF2 684 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 BATF2Q8N1L9 274 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 OR4F17Q8NGA8 305 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 OR4K15Q8NH41 348 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 OR56B4Q8NH76 319 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 OR1L1Q8NH94 360 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 RFESDQ8TAC1 157 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 MYOZ3Q8TDC0 251 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 DEDD2Q8WXF8 326 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 AP3S1Q92572 193 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 ARHGAP5-AS1Q96IT6 56 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 DUX5Q96PT3 197 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 OR4F4Q96R69 305 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 NABP2Q9BQ15 211 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 AIFM2Q9BRQ8 373 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 SCPEP1Q9HB40 452 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 DIABLOQ9NR28 239 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 FAM212BQ9NTI7 297 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-213ENST00000480102 RHBDL2Q9NX52 303 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 AK3Q9UIJ7 227 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 KLK9Q9UKQ9 250 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 HILPDAQ9Y5L2 63 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 MEGF8Q7Z7M0 2845 aa3.87□□□□□ -1.79
PTCD3-213ENST00000480102 SAA2-SAA4A0A096LPE2 208 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 IGKV1-6A0A0C4DH72 117 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 LOC102723971A0A1B0GUV8 181 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 H0YJW9 148 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 H3BUA1 57 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF701M0R085 212 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CREBL2O60519 120 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 PROP1O75360 226 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TNFRSF6BO95407 300 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 IGKV1D-33P01593 117 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 IGKV1-33P01594 117 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 IGHG4P01861 327 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 HLA-DQB1P01920 261 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TFAP2AP05549 437 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 SNRNP70P08621 437 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 SAA2P0DJI9 122 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CT45A6P0DMU7 189 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CT45A5P0DMU8 189 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CT45A7P0DMV0 189 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TMEM11P17152 192 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TBPP20226 339 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 PPIFP30405 207 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CEACAM6P40199 344 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 GPR12P47775 334 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TMBIM6P55061 237 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 DLX1P56177 255 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 OR10A3P58181 314 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 ARPC4P59998 168 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 KRTAP10-3P60369 221 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 BLCAPP62952 87 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 SLC35B1P78383 322 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 MRPS10P82664 201 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 RUNX1Q01196 453 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 SSBP1Q04837 148 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 FOXI1Q12951 378 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CTF1Q16619 201 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 CDNFQ49AH0 187 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms