RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FAM90A22PA8MWA6 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A12PA8MX19 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A5PA8MXJ8 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A23PA8MXZ1 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 F5H0A9 414 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 MED6O75586 246 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 ACTL6BO94805 426 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 IGKV1D-12P01611 117 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 SFTPBP07988 381 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 MSMBP08118 114 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 WNT2P09544 360 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A15PP0C7V4 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A13PP0C7W8 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A14PP0C7W9 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A24PP0C7X0 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 HLA-GP17693 338 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FGF7P21781 194 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAUP35544 74 aaKnown RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 CDKN1BP46527 198 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 RBM11P57052 281 aaKnown RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 BLOC1S1P78537 153 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 COL10A1Q03692 680 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 PJVKQ0ZLH3 352 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF146Q15072 292 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 PYY3Q5JQD4 70 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 C9orf152Q5JTZ5 239 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM166AQ6J272 317 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 SFXN4Q6P4A7 337 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF788Q6ZQV5 615 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 OR2W3Q7Z3T1 314 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 BIVMQ86UB2 503 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 GLCCI1Q86VQ1 547 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 TEX29Q8N6K0 151 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 MAPK1IP1LQ8NDC0 245 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 OR10A7Q8NGE5 316 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 OR56B1Q8NGI3 324 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 OR4D6Q8NGJ1 314 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 OR51T1Q8NGJ9 327 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 IL17DQ8TAD2 202 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 H1FXQ92522 213 aaKnown RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM3DQ96BQ1 224 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 SDSLQ96GA7 329 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 GAFA1Q96PS6 74 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 SELENOIQ9C0D9 397 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 UQCC1Q9NVA1 299 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 RCC2Q9P258 522 aaKnown RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 COMMD3Q9UBI1 195 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 SLC25A10Q9UBX3 287 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-209ENST00000479532 LPAR3Q9UBY5 353 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 KCNS2Q9ULS6 477 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 GOLT1BQ9Y3E0 138 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 IGKV1D-17A0A075B6S4 117 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 LOC105371242A0A075B767 164 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 A0A096LNT2 108 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CXorf65A6NEN9 183 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 A8MWP6 167 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 F8VVB4 439 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 F8VWA3 439 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 GABARAPH6UMI1 98 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 SIRPB1O00241 398 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 DVL1O14640 695 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 MGST3O14880 152 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ENSAO43768 121 aaKnown RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 SCGNO76038 276 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 OR7C1O76099 320 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 SPDEFO95238 335 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 OR2H2O95918 312 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 TGFAP01135 160 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 PPBPP02775 128 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 TK1P04183 234 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 LIPFP07098 398 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 IGHV4-31P0DP07 118 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CALCBP10092 127 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CD37P11049 281 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CR1P17927 2039 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ADCYAP1P18509 176 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ELK1P19419 428 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 RAB5AP20339 215 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 HNF1AP20823 631 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 DUSP1P28562 367 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 DVL1P1P54792 670 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CAV3P56539 151 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 EDDM3BP56851 147 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 OR10A3P58181 314 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 RPS20P60866 119 aaKnown RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 LMO4P61968 165 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 LCN2P80188 198 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 RBM39Q14498 530 aaKnown RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 PIGYQ3MUY2 71 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 DCAF12L2Q5VW00 463 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 WDR25Q64LD2 544 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CFAP161Q6P656 301 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 LYPD2Q6UXB3 125 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 SMIM15Q7Z3B0 74 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 RNF144BQ7Z419 303 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 C1QL2Q7Z5L3 287 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 TGIF2LXQ8IUE1 241 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CBLN2Q8IUK8 224 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CD177Q8N6Q3 437 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms