RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 EPHA1P21709 976 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 F2RP25116 425 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 RAG2P55895 527 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 HABP2Q14520 560 aaPredicted RBP10.55□□□□□ -0.72
CHD3-210ENST00000479080 TMEM187Q14656 261 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 TRIM16LQ309B1 348 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 SP6Q3SY56 376 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 OR2B11Q5JQS5 317 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 LPCAT3Q6P1A2 487 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 C9orf139Q6ZV77 190 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 TGIF2LXQ8IUE1 241 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 MINDY2Q8NBR6 621 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 OR51H1Q8NH63 302 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 ZNF48Q96MX3 618 aaPredicted RBP10.55□□□□□ -0.72
CHD3-210ENST00000479080 ALX4Q9H161 411 aaPredicted RBP10.55□□□□□ -0.72
CHD3-210ENST00000479080 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 A0A1B0GVG6 124 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 C9orf170A2RU37 121 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 C7orf66A4D0T2 115 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 TIMM23O14925 209 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 RAMP3O60896 148 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 SLC22A5O76082 557 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 SFT2D2O95562 160 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 IL5P05113 134 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 OR5AC1P0C628 307 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 FOSL1P15407 271 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 IL3RAP26951 378 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 UBE2MP61081 183 aaKnown RBP10.54□□□□□ -0.72
CHD3-210ENST00000479080 DHRS2Q13268 280 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 SSX2Q16385 188 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 ANKRD55Q3KP44 614 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 ABCA11PQ4W5N1 156 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 ZNF66Q6ZN08 573 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 OR5AN1Q8NGI8 311 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 PIFOQ8TCI5 191 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 TCTEX1D2Q8WW35 142 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 RPEQ96AT9 228 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 RITA1Q96K30 269 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 SCGB3A2Q96PL1 93 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 S1PR3Q99500 378 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 GHITMQ9H3K2 345 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 NUP50Q9UKX7 468 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
CHD3-210ENST00000479080 C2CD3Q4AC94 2353 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 C3orf85A0A1B0GTC6 90 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 FAM90A9PA6NNJ1 464 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 GAPDHP04406 335 aaKnown RBP10.53□□□□□ -0.72
CHD3-210ENST00000479080 IGKV1-16P04430 117 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 UCP1P25874 307 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 THBS3P49746 956 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 TAS2R31P59538 309 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 SLC9A3R2Q15599 337 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 DEFB112Q30KQ8 113 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 TMEM128Q5BJH2 165 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 LYG2Q86SG7 212 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 GLYATL2Q8WU03 294 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 C22orf15Q8WYQ4 148 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 MALSU1Q96EH3 234 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 HSD17B10Q99714 261 aaKnown RBP10.53□□□□□ -0.72
CHD3-210ENST00000479080 TMEM160Q9NX00 188 aa10.53□□□□□ -0.72
CHD3-210ENST00000479080 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.72
CHD3-210ENST00000479080 A0A0A6YYJ9 748 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 A0A0G2JRQ6 117 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 H0Y980 276 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 FCGR3BO75015 233 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 S1PR2O95136 353 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 CD24P25063 80 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 LGALS4P56470 323 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 TATDN3Q17R31 274 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 C2orf68Q2NKX9 166 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 CLEC9AQ6UXN8 241 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 Q71RC1 249 aaPredicted RBP10.52□□□□□ -0.73
CHD3-210ENST00000479080 CMTM1Q8IZ96 169 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 OR8H3Q8N146 312 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 NANPQ8TBE9 248 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 MEGF9Q9H1U4 602 aa10.52□□□□□ -0.73
CHD3-210ENST00000479080 TEX13DA0A0J9YY54 714 aaPredicted RBP10.51□□□□□ -0.73
CHD3-210ENST00000479080 SRRM4A7MD48 611 aaKnown RBP10.51□□□□□ -0.73
CHD3-210ENST00000479080 OOSP1A8MZH6 123 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 VENTXO95231 258 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 HLA-AP01891 365 aaKnown RBP10.51□□□□□ -0.73
CHD3-210ENST00000479080 CEACAM3P40198 252 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 RAB13P51153 203 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 LIN54Q6MZP7 749 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 MOB3BQ86TA1 216 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 SPAG16Q8N0X2 631 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 Q8N6K4 173 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 ZNF431Q8TF32 576 aaPredicted RBP10.51□□□□□ -0.73
CHD3-210ENST00000479080 CASTOR1Q8WTX7 329 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 ADTRPQ96IZ2 230 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 SLC35D1Q9NTN3 355 aa10.51□□□□□ -0.73
CHD3-210ENST00000479080 LIN7CQ9NUP9 197 aaKnown RBP10.51□□□□□ -0.73
CHD3-210ENST00000479080 VGLL3A8MV65 326 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 TXNL1O43396 289 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 PRAF2O60831 178 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms