RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CAPGP40121 348 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 HSPA13P48723 471 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 LINC00205P59089 165 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
VIM-204ENST00000478746 PDPNQ86YL7 162 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 APH1BQ8WW43 257 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 FAM46BQ96A09 425 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
VIM-204ENST00000478746 SULT4A1Q9BR01 284 aa12.91□□□□□ -0.34
VIM-204ENST00000478746 C11orf54Q9H0W9 315 aaPredicted RBP12.91□□□□□ -0.34
VIM-204ENST00000478746 KLK5Q9Y337 293 aaPredicted RBP12.91□□□□□ -0.34
VIM-204ENST00000478746 A0A1W2PPK0 400 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 PROP1O75360 226 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 APOA2P02652 100 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 CEACAM6P40199 344 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 KIR2DS2P43631 304 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 SMN1Q16637 294 aaKnown RBP12.9□□□□□ -0.34
VIM-204ENST00000478746 YIF1BQ5BJH7 314 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 SLC16A13Q7RTY0 426 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 ZNF383Q8NA42 475 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 SETD9Q8NE22 299 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 SETD6Q8TBK2 473 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 EDARADDQ8WWZ3 215 aa12.9□□□□□ -0.34
VIM-204ENST00000478746 CHMP1AQ9HD42 196 aaPredicted RBP12.9□□□□□ -0.34
VIM-204ENST00000478746 A0A0J9YWU9 116 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 BMPR1BO00238 502 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 RBMXL2O75526 392 aaKnown RBP12.89□□□□□ -0.35
VIM-204ENST00000478746 DEDDO75618 318 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 LALBAP00709 142 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 RPS11P62280 158 aaKnown RBP eCLIP12.89□□□□□ -0.35
VIM-204ENST00000478746 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
VIM-204ENST00000478746 PHB2Q99623 299 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 ZC4H2Q9NQZ6 224 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
VIM-204ENST00000478746 ZNF221Q9UK13 617 aa12.89□□□□□ -0.35
VIM-204ENST00000478746 KIAA1109Q2LD37 5005 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 WBP4O75554 376 aaKnown RBP12.88□□□□□ -0.35
VIM-204ENST00000478746 APELAP0DMC3 54 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 FOLR2P14207 255 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 MYL12AP19105 171 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 ZBTB25P24278 435 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
VIM-204ENST00000478746 ZNF880Q6PDB4 577 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 C6orf201Q7Z4U5 140 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 C8orf59Q8N0T1 100 aaPredicted RBP12.88□□□□□ -0.35
VIM-204ENST00000478746 SVOPQ8N4V2 548 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
VIM-204ENST00000478746 EXOSC1Q9Y3B2 195 aaKnown RBP12.88□□□□□ -0.35
VIM-204ENST00000478746 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
VIM-204ENST00000478746 IRGMA1A4Y4 181 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 MSGN1A6NI15 193 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 NDUFB8O95169 186 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 NAPSAO96009 420 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 CRYGBP07316 175 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 ATP5G2Q06055 141 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 ADAD2Q8NCV1 583 aaKnown RBP12.87□□□□□ -0.35
VIM-204ENST00000478746 GATAD1Q8WUU5 269 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 PGLYRP3Q96LB9 341 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 OR1A1Q9P1Q5 309 aa12.87□□□□□ -0.35
VIM-204ENST00000478746 DIMT1Q9UNQ2 313 aaKnown RBP12.87□□□□□ -0.35
VIM-204ENST00000478746 HECTD4Q9Y4D8 3996 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 GNAO1P09471 354 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 OR9G9P0C7N8 305 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 RHOGP84095 191 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 TNFRSF9Q07011 255 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 MED21Q13503 144 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
VIM-204ENST00000478746 MOB1BQ7L9L4 216 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 THRSPQ92748 146 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 PTX4Q96A99 478 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 UQCC2Q9BRT2 126 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 AKIP1Q9NQ31 210 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 CLEC2DQ9UHP7 191 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 RAB26Q9ULW5 256 aa12.86□□□□□ -0.35
VIM-204ENST00000478746 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.85□□□□□ -0.35
VIM-204ENST00000478746 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 M0R1X1 148 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 TUSC2O75896 110 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 EDN2P20800 178 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 LGALS9CQ6DKI2 356 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 WFDC3Q8IUB2 231 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 DERL3Q96Q80 235 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 Q9H521 79 aa12.85□□□□□ -0.35
VIM-204ENST00000478746 ZNF230Q9UIE0 474 aaPredicted RBP12.85□□□□□ -0.35
VIM-204ENST00000478746 MPPED1O15442 326 aa12.84□□□□□ -0.35
VIM-204ENST00000478746 PRH1P02810 166 aa12.84□□□□□ -0.35
VIM-204ENST00000478746 HTR2CP28335 458 aa12.84□□□□□ -0.35
VIM-204ENST00000478746 BMI1P35226 326 aa12.84□□□□□ -0.35
VIM-204ENST00000478746 OR10K2Q6IF99 312 aa12.84□□□□□ -0.35
VIM-204ENST00000478746 TMEM80Q96HE8 168 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms