RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 VAX1Q5SQQ9 334 aa21.32■■□□□ 1
CCM2-211ENST00000478582 C11orf88Q6PI97 169 aa21.32■■□□□ 1
CCM2-211ENST00000478582 FAM131AQ6UXB0 335 aa21.32■■□□□ 1
CCM2-211ENST00000478582 GLDNQ6ZMI3 551 aaPredicted RBP21.32■■□□□ 1
CCM2-211ENST00000478582 BATF3Q9NR55 127 aa21.32■■□□□ 1
CCM2-211ENST00000478582 PLSCR3Q9NRY6 295 aa21.32■■□□□ 1
CCM2-211ENST00000478582 ETV6P41212 452 aa21.31■■□□□ 1
CCM2-211ENST00000478582 THBS3P49746 956 aa21.31■■□□□ 1
CCM2-211ENST00000478582 C5orf56Q8N8D9 126 aa21.31■■□□□ 1
CCM2-211ENST00000478582 TMEM229BQ8NBD8 167 aa21.31■■□□□ 1
CCM2-211ENST00000478582 OR6F1Q8NGZ6 308 aa21.31■■□□□ 1
CCM2-211ENST00000478582 ADTRPQ96IZ2 230 aa21.31■■□□□ 1
CCM2-211ENST00000478582 WASHC3Q9Y3C0 194 aa21.31■■□□□ 1
CCM2-211ENST00000478582 V9GYH0 126 aa21.31■■□□□ 1
CCM2-211ENST00000478582 DUTP33316 252 aaKnown RBP21.3■■□□□ 1
CCM2-211ENST00000478582 LINC00205P59089 165 aa21.3■■□□□ 1
CCM2-211ENST00000478582 MOB3AQ96BX8 217 aa21.3■■□□□ 1
CCM2-211ENST00000478582 RNF5Q99942 180 aa21.3■■□□□ 1
CCM2-211ENST00000478582 ZNF2Q9BSG1 426 aaPredicted RBP21.3■■□□□ 1
CCM2-211ENST00000478582 RNF114Q9Y508 228 aa21.3■■□□□ 1
CCM2-211ENST00000478582 CD74P04233 296 aa21.29■■□□□ 1
CCM2-211ENST00000478582 TAS2R19P59542 299 aa21.29■■□□□ 1
CCM2-211ENST00000478582 PDPNQ86YL7 162 aa21.29■■□□□ 1
CCM2-211ENST00000478582 ZBTB34Q8NCN2 500 aa21.29■■□□□ 1
CCM2-211ENST00000478582 OR2T6Q8NHC8 308 aa21.29■■□□□ 1
CCM2-211ENST00000478582 SECTM1Q8WVN6 248 aa21.29■■□□□ 1
CCM2-211ENST00000478582 WFDC12Q8WWY7 111 aa21.29■■□□□ 1
CCM2-211ENST00000478582 DDB2Q92466 427 aa21.29■■□□□ 1
CCM2-211ENST00000478582 RBMXL1Q96E39 390 aaKnown RBP21.29■■□□□ 1
CCM2-211ENST00000478582 APOA2P02652 100 aa21.28■■□□□ 1
CCM2-211ENST00000478582 CD3DP04234 171 aa21.28■■□□□ 1
CCM2-211ENST00000478582 F2RL1P55085 397 aa21.28■■□□□ 1
CCM2-211ENST00000478582 HERV-K104P61576 105 aa21.28■■□□□ 1
CCM2-211ENST00000478582 EIF4EBP1Q13541 118 aaPredicted RBP21.28■■□□□ 1
CCM2-211ENST00000478582 ABCA11PQ4W5N1 156 aa21.28■■□□□ 1
CCM2-211ENST00000478582 PRR31Q5SQ13 230 aa21.28■■□□□ 1
CCM2-211ENST00000478582 Q6ZS46 218 aa21.28■■□□□ 1
CCM2-211ENST00000478582 Q8N9W7 124 aa21.28■■□□□ 1
CCM2-211ENST00000478582 RITA1Q96K30 269 aa21.28■■□□□ 1
CCM2-211ENST00000478582 SLC5A7Q9GZV3 580 aa21.28■■□□□ 1
CCM2-211ENST00000478582 CCL28Q9NRJ3 127 aa21.28■■□□□ 1
CCM2-211ENST00000478582 TAS2R8Q9NYW2 309 aa21.28■■□□□ 1
CCM2-211ENST00000478582 NCBP2LA6PVI3 153 aaKnown RBP21.27■■□□□ 1
CCM2-211ENST00000478582 H7C2Y5 167 aa21.27■■□□□ 1
CCM2-211ENST00000478582 CSF1P09603 554 aa21.27■■□□□ 1
CCM2-211ENST00000478582 FXYD4P59646 89 aa21.27■■□□□ 1
CCM2-211ENST00000478582 TSPAN5P62079 268 aa21.27■■□□□ 1
CCM2-211ENST00000478582 RNASE10Q5GAN6 216 aaKnown RBP21.27■■□□□ 1
CCM2-211ENST00000478582 SPANXN2Q5MJ10 180 aa21.27■■□□□ 1
CCM2-211ENST00000478582 NPBQ8NG41 125 aa21.27■■□□□ 1
CCM2-211ENST00000478582 BORCS5Q969J3 196 aa21.27■■□□□ 1
CCM2-211ENST00000478582 HSD17B10Q99714 261 aaKnown RBP21.27■■□□□ 1
CCM2-211ENST00000478582 SLC35D1Q9NTN3 355 aa21.27■■□□□ 1
CCM2-211ENST00000478582 LIN7CQ9NUP9 197 aaKnown RBP21.27■■□□□ 1
CCM2-211ENST00000478582 NBEAL1Q6ZS30 2694 aa21.27■■□□□ 1
CCM2-211ENST00000478582 LINC00473A8K010 186 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 M0QYG6 137 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 RRASP10301 218 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 PROK1P58294 105 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 ZNF79Q15937 498 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 ZNF66Q6ZN08 573 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 ARRDC1Q8N5I2 433 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 FAM71E2Q8N5Q1 922 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 TINAGL1Q9GZM7 467 aaPredicted RBP21.26■□□□□ 0.99
CCM2-211ENST00000478582 SIGLEC9Q9Y336 463 aa21.26■□□□□ 0.99
CCM2-211ENST00000478582 NDUFA3O95167 84 aa21.25■□□□□ 0.99
CCM2-211ENST00000478582 IFNA6P05013 189 aa21.25■□□□□ 0.99
CCM2-211ENST00000478582 GNRHRP30968 328 aa21.25■□□□□ 0.99
CCM2-211ENST00000478582 SRSF4Q08170 494 aaKnown RBP21.25■□□□□ 0.99
CCM2-211ENST00000478582 MMDQ15546 238 aa21.25■□□□□ 0.99
CCM2-211ENST00000478582 STEAP1BQ6NZ63 245 aa21.25■□□□□ 0.99
CCM2-211ENST00000478582 THAP7Q9BT49 309 aaPredicted RBP21.25■□□□□ 0.99
CCM2-211ENST00000478582 SERTAD4Q9NUC0 356 aa21.25■□□□□ 0.99
CCM2-211ENST00000478582 NBR2O15453 112 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 RAB3DO95716 219 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 IGKV1-16P04430 117 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 CNPY1Q3B7I2 92 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 PYDC2Q56P42 97 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 TMEM17Q86X19 198 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 BVESQ8NE79 360 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 FLYWCH2Q96CP2 140 aaKnown RBP21.24■□□□□ 0.99
CCM2-211ENST00000478582 CITED1Q99966 193 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 FXYD6Q9H0Q3 95 aa21.24■□□□□ 0.99
CCM2-211ENST00000478582 ANKRD20A5PA0PJZ0 165 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 CNTFRP26992 372 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 UCP3P55916 312 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 RPL30P62888 115 aaKnown RBP21.23■□□□□ 0.99
CCM2-211ENST00000478582 RTL8BQ17RB0 113 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 TMEM177Q53S58 311 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 ZNF818PQ6ZRF7 136 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 MFSD4AQ8N468 514 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 RASL11BQ9BPW5 248 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 PRELID3BQ9Y3B1 194 aa21.23■□□□□ 0.99
CCM2-211ENST00000478582 SH2D7A6NKC9 451 aaPredicted RBP21.22■□□□□ 0.99
CCM2-211ENST00000478582 KRTAP10-3P60369 221 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 CBX3Q13185 183 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 MEF2DQ14814 521 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 AADACL3Q5VUY0 350 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 LPCAT3Q6P1A2 487 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 LINC00299Q6ZSB3 139 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms