RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 GPR12P47775 334 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 THBS3P49746 956 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 AKR1C2P52895 323 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 EDDM3BP56851 147 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 TMEM33P57088 247 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 RPL23AP62750 156 aaKnown RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 VAMP2P63027 116 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 TFF3Q07654 80 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 EDDM3AQ14507 147 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 MST1LQ2TV78 715 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 HFEQ30201 348 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 AARDQ4LEZ3 155 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 ZNF585BQ52M93 769 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 DHRS7BQ6IAN0 325 aaPredicted RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 UQCC3Q6UW78 93 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 HEPN1Q6WQI6 88 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 SLC7A5P1Q8MH63 180 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 MUC15Q8N387 334 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 STPG2Q8N412 459 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 BOLLQ8N9W6 283 aaKnown RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 DMBX1Q8NFW5 382 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 OR52L2PQ8NGH6 319 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 RNASE11Q8TAA1 199 aaKnown RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 NEU4Q8WWR8 484 aaPredicted RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 TNFRSF14Q92956 283 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 CIB3Q96Q77 187 aaPredicted RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 ABHD14AQ9BUJ0 271 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 RAB1BQ9H0U4 201 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 CBLN4Q9NTU7 201 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 IDI2-AS1Q9NZ38 188 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 PRR13Q9NZ81 148 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 SLC25A10Q9UBX3 287 aaPredicted RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 RCL1Q9Y2P8 373 aaKnown RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 PRELID3BQ9Y3B1 194 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 LSM5Q9Y4Y9 91 aaKnown RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 NOTCH2Q04721 2471 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 ARFGEF3Q5TH69 2177 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 USF3Q68DE3 2245 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 IGHV3OR15-7A0A075B7D8 119 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 A0A087X0M5 115 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 A0A1B0GX30 115 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 MSGN1A6NI15 193 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 DEFB108AA8MXU0 73 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 LEUTXA8MZ59 168 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 KRBOX1C9JBD0 128 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 SOX15O60248 233 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 SCGB1D2O95969 90 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 FGF2P09038 288 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 LOXP28300 417 aaPredicted RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 DUTP33316 252 aaKnown RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 ADMP35318 185 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 PPP1CCP36873 323 aaKnown RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 BLOC1S1P78537 153 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 CCL8P80075 99 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 POU2AF1Q16633 256 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 C17orf58Q2M2W7 97 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 TMEM155Q4W5P6 130 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 PDLIM3Q53GG5 364 aaPredicted RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 SPRNQ5BIV9 151 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 ALKAL2Q6UX46 152 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 DTX2Q86UW9 622 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 STX12Q86Y82 276 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 SPAG16Q8N0X2 631 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 FGFRL1Q8N441 504 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 LINC00311Q8N616 119 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 ZNRF1Q8ND25 227 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 OR52E5Q8NH55 327 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 ZNF596Q8TC21 504 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 GPR146Q96CH1 333 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 SMIM8Q96KF7 97 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 ZNF714Q96N38 554 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 CITED4Q96RK1 184 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 GINS3Q9BRX5 216 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 PARD6GQ9BYG4 376 aaPredicted RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 IFI27L2Q9H2X8 130 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 SDHAF2Q9NX18 166 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 HSPB7Q9UBY9 170 aa5.51□□□□□ -1.53
LDB3-206ENST00000477489 RPUSD1Q9UJJ7 312 aaKnown RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 STRAPQ9Y3F4 350 aaKnown RBP5.51□□□□□ -1.53
LDB3-206ENST00000477489 RAI1Q7Z5J4 1906 aaPredicted RBP5.5□□□□□ -1.53
LDB3-206ENST00000477489 ITPR3Q14573 2671 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TRAV39A0A0B4J263 110 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 RAB19A4D1S5 217 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 ANKRD34BA5PLL1 514 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 MFSD2BA6NFX1 497 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 UMAD1C9J7I0 102 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TEX46H3BTG2 121 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TRIM77I1YAP6 450 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TMPRSS2O15393 492 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TNFSF12O43508 249 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 SYNGR2O43760 224 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 IGKV1-39P01597 117 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 IGKV1-5P01602 117 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 GYPAP02724 150 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 IGKV1D-39P04432 117 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 NQO2P16083 231 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 LPAR6P43657 344 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 SULT1A1P50225 295 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms