RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FOXJ2Q9P0K8 574 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 RNF212BA8MTL3 300 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 SERF1AO75920 110 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 KITLGP21583 273 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 CTRLP40313 264 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 CDC34P49427 236 aaPredicted RBP12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 COMPP49747 757 aaPredicted RBP12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 MOB1BQ7L9L4 216 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 CPT1CQ8TCG5 803 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 KCNE4Q8WWG9 221 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 SPACA9Q96E40 222 aaPredicted RBP12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 SAMD10Q9BYL1 202 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 TNRC6AQ8NDV7 1962 aaKnown RBP12.89□□□□□ -0.35
CLSTN1-205ENST00000477264 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 C1QTNF9BB2RNN3 333 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 DNPH1O43598 174 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 NPPCP23582 126 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 LINC00310P59036 64 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 OR8G2PQ6IF36 304 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 C6orf15Q6UXA7 325 aaPredicted RBP12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 MKXQ8IYA7 352 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 GATAD1Q8WUU5 269 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 NKX6-3A6NJ46 265 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 CLDN1O95832 211 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 TOMM40O96008 361 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 ZNF32P17041 273 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 CDKN1AP38936 164 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 GNB1P62873 340 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 OR2Y1Q8NGV0 311 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 HSPB7Q9UBY9 170 aa12.88□□□□□ -0.35
CLSTN1-205ENST00000477264 FOLR3P41439 243 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 COX19Q49B96 90 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 KLHDC1Q8N7A1 406 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 SIGLECL1Q8N7X8 197 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 OR5T1Q8NG75 326 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 OR10G8Q8NGN5 311 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 PRDM14Q9GZV8 571 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 ZNF703Q9H7S9 590 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 SAA2-SAA4A0A096LPE2 208 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 GRIFINA4D1Z8 144 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 TRAPPC2LH3BP13 241 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 KLF7O75840 302 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 DKK1O94907 266 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 OR5G3P0C626 314 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 PTTG1IPP53801 180 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 TDRG1Q3Y452 100 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 OR2H1Q9GZK4 316 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 GSX1Q9H4S2 264 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 ERRFI1Q9UJM3 462 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-205ENST00000477264 C1QTNF9P0C862 333 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 TFPI2P48307 235 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 SPATA45Q537H7 98 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 RIPPLY2Q5TAB7 128 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 OR1K1Q8NGR3 316 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 EP300Q09472 2414 aaPredicted RBP12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 A0A1W2PN81 502 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 C9orf172C9J069 976 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 DIRC3C9JPN6 131 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 MT-ND6P03923 174 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 REG1AP05451 166 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 TIMP3P35625 211 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 ZNF585BQ52M93 769 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 ZNF468Q5VIY5 522 aaPredicted RBP12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 TCF23Q7RTU1 214 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 PSMF1Q92530 271 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 C1QTNF5Q9BXJ0 243 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 PLA2G3Q9NZ20 509 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 LAMTOR2Q9Y2Q5 125 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 LY96Q9Y6Y9 160 aa12.86□□□□□ -0.35
CLSTN1-205ENST00000477264 LOC102723996A0A087X1L8 192 aa12.85□□□□□ -0.35
CLSTN1-205ENST00000477264 GJE1A6NN92 205 aa12.85□□□□□ -0.35
CLSTN1-205ENST00000477264 IGHEP01854 428 aa12.85□□□□□ -0.35
CLSTN1-205ENST00000477264 PRSS12P56730 875 aa12.85□□□□□ -0.35
CLSTN1-205ENST00000477264 PSG4Q00888 419 aa12.85□□□□□ -0.35
CLSTN1-205ENST00000477264 MORN2Q502X0 79 aa12.85□□□□□ -0.35
CLSTN1-205ENST00000477264 NDUFB4O95168 129 aa12.84□□□□□ -0.35
CLSTN1-205ENST00000477264 FTH1P19P0C7X4 201 aa12.84□□□□□ -0.35
CLSTN1-205ENST00000477264 ZNF90Q03938 601 aa12.84□□□□□ -0.35
CLSTN1-205ENST00000477264 UBE2V1Q13404 147 aa12.84□□□□□ -0.35
CLSTN1-205ENST00000477264 OR10J3Q5JRS4 329 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms