RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 APELAP0DMC3 54 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 FOLR2P14207 255 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 TNFRSF9Q07011 255 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 C6orf201Q7Z4U5 140 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 LYG2Q86SG7 212 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 ADAD2Q8NCV1 583 aaKnown RBP12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 FGF20Q9NP95 211 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 BABAM2Q9NXR7 383 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 TECRQ9NZ01 308 aaKnown RBP12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 LOC102724200A0A096LPH7 203 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 CEACAM6P40199 344 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 RHOGP84095 191 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 TMPRSS11AQ6ZMR5 421 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 SETD6Q8TBK2 473 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 EDARADDQ8WWZ3 215 aa12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 CHMP1AQ9HD42 196 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-203ENST00000476513 MSGN1A6NI15 193 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 NDUFB8O95169 186 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 OR9G9P0C7N8 305 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 MRGPRG-AS1Q2M3A8 158 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 YIF1BQ5BJH7 314 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 WFDC3Q8IUB2 231 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 PTX4Q96A99 478 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 PGLYRP3Q96LB9 341 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 PHB2Q99623 299 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 SLC35D1Q9NTN3 355 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 SELENOKQ9Y6D0 94 aa12.29□□□□□ -0.44
APOBEC3F-203ENST00000476513 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 FAM223BA6NKX1 122 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 M0R1X1 148 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 PRH1P02810 166 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 ZBTB25P24278 435 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 ATP5G2Q06055 141 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 FAM223AQ8IWN6 122 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 ZFP41Q8N8Y5 198 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 APH1BQ8WW43 257 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 UQCC2Q9BRT2 126 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 GHRLQ9UBU3 117 aa12.28□□□□□ -0.44
APOBEC3F-203ENST00000476513 TRBV9A0A0B4J1U6 114 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 ATF4P18848 351 aaPredicted RBP12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 DCKP27707 260 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 HTR2CP28335 458 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 BMI1P35226 326 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 ZNF45Q02386 682 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 OR10K2Q6IF99 312 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 OR52B4Q8NGK2 314 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 THRSPQ92748 146 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 HARBI1Q96MB7 349 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 SLC29A1Q99808 456 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 TP53TG1Q9Y2A0 90 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.45
APOBEC3F-203ENST00000476513 TRBV6-6A0A0A6YYG2 114 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 SRRM4A7MD48 611 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 SPRY2O43597 315 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 TUSC2O75896 110 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 RPS27AP62979 156 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 SMN1Q16637 294 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 CBR4Q8N4T8 237 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 CACNG8Q8WXS5 425 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 DERL3Q96Q80 235 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 CLEC2DQ9UHP7 191 aa12.26□□□□□ -0.45
APOBEC3F-203ENST00000476513 LGALS9O00182 355 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 MPPED1O15442 326 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 OR2C1O95371 312 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 SCTP09683 121 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 CBLN1P23435 193 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 TNXAQ16473 311 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 ZNF57Q68EA5 555 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 Q6ZWC4 215 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 NKAIN3Q8N8D7 197 aa12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 PHLDA1Q8WV24 401 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3F-203ENST00000476513 SHOXO15266 292 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 GGCTO75223 188 aaKnown RBP12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 WBP4O75554 376 aaKnown RBP12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 SCAF4O95104 1147 aaKnown RBP12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 UBBP0CG47 229 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 PRSS8Q16651 343 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 TM4SF20Q53R12 229 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 NECAP1Q8NC96 275 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 PYDC1Q8WXC3 89 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 SRSF12Q8WXF0 261 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms