RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 CX3CL1P78423 397 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 PITPNAQ00169 270 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 BEAN1Q3B7T3 259 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 OR5B12Q96R08 314 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 GPHA2Q96T91 129 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 DCSTAMPQ9H295 470 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 GHITMQ9H3K2 345 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 DIABLOQ9NR28 239 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 ANXA10Q9UJ72 324 aa10.3□□□□□ -0.76
NIPAL3-206ENST00000475663 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 LINC00473A8K010 186 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 CA2P00918 260 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 IGF1P05019 195 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 EIF4EP06730 217 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 EGR2P11161 476 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 SCAND1P57086 179 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 PJVKQ0ZLH3 352 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 OR2B11Q5JQS5 317 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 CXorf66Q5JRM2 361 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 GPR107Q5VW38 600 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 ZNF695Q8IW36 515 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 MRPL41Q8IXM3 137 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 BEST4Q8NFU0 473 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 SLC25A46Q96AG3 418 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 FLYWCH2Q96CP2 140 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 COMMD3Q9UBI1 195 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 OR2W1Q9Y3N9 320 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
NIPAL3-206ENST00000475663 SRRM4A7MD48 611 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 SOX15O60248 233 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 RBBP9O75884 186 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 TUSC2O75896 110 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 IGLV2-23P01705 113 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 IGHG4P01861 327 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 PPIFP30405 207 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 DUTP33316 252 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 THBS3P49746 956 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 LUMP51884 338 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 RAB25P57735 213 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 GNB1P62873 340 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 RPL30P62888 115 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 FOXE3Q13461 319 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 UBE2NLQ5JXB2 153 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 CNIH2Q6PI25 160 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 COMMD1Q8N668 190 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 LINC00482Q8N8I6 264 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 SNAPC3Q92966 411 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 HARBI1Q96MB7 349 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 TSNAXQ99598 290 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 GNB4Q9HAV0 340 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 ZFP57Q9NU63 452 aa10.28□□□□□ -0.76
NIPAL3-206ENST00000475663 A0A1W2PN81 502 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 ARPC1BO15143 372 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 DIRAS3O95661 229 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 CRYZL1O95825 349 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 HLA-DQB1P01920 261 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 ELANEP08246 267 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 AADACP22760 399 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 PSMB8P28062 276 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 CHRNA7P36544 502 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 TAS2R20P59543 309 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 ARPC4P59998 168 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 TAGLNQ01995 201 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 TMEM69Q5SWH9 247 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 HOGA1Q86XE5 327 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 CROCCP3Q8IVE0 287 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 GRPEL2Q8TAA5 225 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 S100A16Q96FQ6 103 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 GON7Q9BXV9 100 aa10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 MRPS7Q9Y2R9 242 aaKnown RBP10.27□□□□□ -0.77
NIPAL3-206ENST00000475663 A0A0A6YYH2 397 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 A6NJ64 397 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 CCL24O00175 119 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 SHOXO15266 292 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 PLXNB1O43157 2135 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 TNFSF12O43508 249 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 XRCC3O43542 346 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 HPGDSO60760 199 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 FCGR3BO75015 233 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 IGLV2-14P01704 120 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 CTXN2P0C2S0 81 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 APELAP0DMC3 54 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 FCGR2CP31995 323 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 SSBP2P81877 361 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 KIAA0141Q14154 515 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 CTF1Q16619 201 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 RNASE12Q5GAN4 147 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 FOXB2Q5VYV0 432 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 ZNF660Q6AZW8 331 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 TMEM65Q6PI78 240 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 UNQ5815/PRO19632Q6UWF5 114 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
NIPAL3-206ENST00000475663 PPP1R27Q86WC6 154 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms