RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TAS2R43P59537 309 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
SKA3-206ENST00000475251 CBX3Q13185 183 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 DYRK1AQ13627 763 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 CD300EQ496F6 205 aaPredicted RBP9.52□□□□□ -0.89
SKA3-206ENST00000475251 ZNF880Q6PDB4 577 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 SLC16A13Q7RTY0 426 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 DRAXINQ8NBI3 349 aaPredicted RBP9.52□□□□□ -0.89
SKA3-206ENST00000475251 APH1BQ8WW43 257 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 PYDC1Q8WXC3 89 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 PTX4Q96A99 478 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 PGLYRP3Q96LB9 341 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 FAAP24Q9BTP7 215 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 C9orf16Q9BUW7 83 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 TMEM59Q9BXS4 323 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 C11orf54Q9H0W9 315 aaPredicted RBP9.52□□□□□ -0.89
SKA3-206ENST00000475251 DIMT1Q9UNQ2 313 aaKnown RBP9.52□□□□□ -0.89
SKA3-206ENST00000475251 FAM223BA6NKX1 122 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 DYNC1I1O14576 645 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 TUSC2O75896 110 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 TRBV12-3P01733 135 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 CD7P09564 240 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 ZFP1Q6P2D0 407 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 C6orf201Q7Z4U5 140 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 FAM223AQ8IWN6 122 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.51□□□□□ -0.89
SKA3-206ENST00000475251 DERL3Q96Q80 235 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 SLC35D1Q9NTN3 355 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 PLEKHJ1Q9NW61 149 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 FAM53CQ9NYF3 392 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 TECRQ9NZ01 308 aaKnown RBP9.51□□□□□ -0.89
SKA3-206ENST00000475251 ADAM30Q9UKF2 790 aa9.51□□□□□ -0.89
SKA3-206ENST00000475251 TRBV6-6A0A0A6YYG2 114 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 ZNF785A8K8V0 405 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 NDUFB8O95169 186 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 LALBAP00709 142 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 MAP2K4P45985 399 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 RPS27AP62979 156 aaKnown RBP9.5□□□□□ -0.89
SKA3-206ENST00000475251 HLA-DRB3P79483 266 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 SSBP2P81877 361 aaPredicted RBP9.5□□□□□ -0.89
SKA3-206ENST00000475251 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
SKA3-206ENST00000475251 GUCA2BQ16661 112 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 TTC23Q5W5X9 447 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 KCNG3Q8TAE7 436 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 HARBI1Q96MB7 349 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 PARP12Q9H0J9 701 aaKnown RBP9.5□□□□□ -0.89
SKA3-206ENST00000475251 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
SKA3-206ENST00000475251 MPPED1O15442 326 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 KIR2DS2P43631 304 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 DEFA5Q01523 94 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 PMS2P11Q13670 270 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
SKA3-206ENST00000475251 SMN1Q16637 294 aaKnown RBP9.49□□□□□ -0.89
SKA3-206ENST00000475251 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 GLT8D1Q68CQ7 371 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 C10orf67Q8IYJ2 551 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 ZFP41Q8N8Y5 198 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 ZNF555Q8NEP9 628 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 TMEM80Q96HE8 168 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 GGTLC1Q9BX51 225 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 TM2D1Q9BX74 207 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 OR1A1Q9P1Q5 309 aa9.49□□□□□ -0.89
SKA3-206ENST00000475251 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
SKA3-206ENST00000475251 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.48□□□□□ -0.89
SKA3-206ENST00000475251 M0R1X1 148 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 BMPR1BO00238 502 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 SHOXO15266 292 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 CREBL2O60519 120 aaPredicted RBP9.48□□□□□ -0.89
SKA3-206ENST00000475251 PROP1O75360 226 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 WBP4O75554 376 aaKnown RBP9.48□□□□□ -0.89
SKA3-206ENST00000475251 IGLV2-23P01705 113 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 CD1AP06126 327 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 CRYGBP07316 175 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 RRASP10301 218 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 SERPINB10P48595 397 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 RHOGP84095 191 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 PJVKQ0ZLH3 352 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 RTL8BQ17RB0 113 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 VMA21Q3ZAQ7 101 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 ADAD2Q8NCV1 583 aaKnown RBP9.48□□□□□ -0.89
SKA3-206ENST00000475251 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 C12orf4Q9NQ89 552 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 CLEC2DQ9UHP7 191 aa9.48□□□□□ -0.89
SKA3-206ENST00000475251 ZNF230Q9UIE0 474 aaPredicted RBP9.48□□□□□ -0.89
SKA3-206ENST00000475251 LOC102724200A0A096LPH7 203 aaPredicted RBP9.47□□□□□ -0.89
SKA3-206ENST00000475251 PNMA8CA0A1B0GUJ8 204 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 C2orf70A6NJV1 201 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 BPNT1O95861 308 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 FOLR2P14207 255 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 HTR2CP28335 458 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 TPBGQ13641 420 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 OR10K2Q6IF99 312 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms