RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 IFITM5A6NNB3 132 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 M0R1X1 148 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 ARPC1BO15143 372 aaKnown RBP15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 CA2P00918 260 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 FCGR3AP08637 254 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 RAB6AP20340 208 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 TAGLNQ01995 201 aaKnown RBP15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 SSX1Q16384 188 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 OR10R2Q8NGX6 335 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 ARPC1AQ92747 370 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 CABLES2Q9BTV7 478 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 SLC35D1Q9NTN3 355 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 NDUFB11Q9NX14 153 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 KCNK7Q9Y2U2 307 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 TENM3Q9P273 2699 aa15.76■□□□□ 0.11
PDLIM4-206ENST00000474421 TRDV1A0A1B0GX56 115 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 BET1O15155 118 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 LY86O95711 162 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 GALP22466 123 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 LGALS7P47929 136 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 CBX3Q13185 183 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 LFNGQ8NES3 379 aa15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 FAM103A1Q9BTL3 118 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 ALX4Q9H161 411 aaPredicted RBP15.75■□□□□ 0.11
PDLIM4-206ENST00000474421 TRBV6-7A0A0A0MS04 114 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 SLC25A17O43808 307 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 MRPS14O60783 128 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 HSPB1P04792 205 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 OR8U9P0C7N5 309 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 RAB3BP20337 219 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 TPPP2P59282 170 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 PLA2G7Q13093 441 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 FXYD3Q14802 87 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 ARL6IP1Q15041 203 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 CASTOR1Q8WTX7 329 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 DLX4Q92988 240 aaPredicted RBP15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 OR2D2Q9H210 308 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 RAB26Q9ULW5 256 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 U3KQK5 164 aa15.74■□□□□ 0.11
PDLIM4-206ENST00000474421 H3BUA1 57 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 RAB27BO00194 218 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 MFNGO00587 321 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 SAP30O75446 220 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 CNIH1O95406 144 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 GSTT2P0CG29 244 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 GSTT2BP0CG30 244 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 HIST1H1DP16402 221 aaKnown RBP15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 GNB3P16520 340 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 TALDO1P37837 337 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 SLURP1P55000 103 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 OR10A3P58181 314 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 SRSF7Q16629 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 MOGAT2Q3SYC2 334 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 IGSF11Q5DX21 431 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 GRPEL2Q8TAA5 225 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 MS4A10Q96PG2 267 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 GINS4Q9BRT9 223 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 TPSG1Q9NRR2 321 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 RBM7Q9Y580 266 aaKnown RBP15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 SMAD5-AS1Q9Y6J3 95 aa15.73■□□□□ 0.11
PDLIM4-206ENST00000474421 A0A075B6Q4 140 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 IGHV4OR15-8A0A075B7B6 117 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 A0A087WW49 117 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 TRGV3P03979 118 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 RRASP10301 218 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 LINC00205P59089 165 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 GABARAPL2P60520 117 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 ARFRP1Q13795 201 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 RTL8BQ17RB0 113 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 OR6Q1Q8NGQ2 317 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 RHOVQ96L33 236 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 TMEM68Q96MH6 324 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 SDHAF2Q9NX18 166 aa15.72■□□□□ 0.11
PDLIM4-206ENST00000474421 SHISA3A0PJX4 238 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 IGHV3-11P01762 117 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 PITPNAQ00169 270 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 ACSM6Q6P461 480 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 Q6ZS49 121 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 POC5Q8NA72 575 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 ADTRPQ96IZ2 230 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 HARBI1Q96MB7 349 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 ZNF355PQ9NSJ1 428 aa15.71■□□□□ 0.11
PDLIM4-206ENST00000474421 A0A0G2JLM5 398 aa15.7■□□□□ 0.1
PDLIM4-206ENST00000474421 SHOXO15266 292 aa15.7■□□□□ 0.1
PDLIM4-206ENST00000474421 C22orf42Q6IC83 251 aa15.7■□□□□ 0.1
PDLIM4-206ENST00000474421 OR4C12Q96R67 309 aa15.7■□□□□ 0.1
PDLIM4-206ENST00000474421 ZNF230Q9UIE0 474 aaPredicted RBP15.7■□□□□ 0.1
PDLIM4-206ENST00000474421 C13orf42A0A1B0GVH6 325 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 IGLV2-23P01705 113 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 CRYGBP07316 175 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 DTYMKP23919 212 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 TMEM177Q53S58 311 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 MAFIPQ8WZ33 124 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 ELOVL1Q9BW60 279 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 ATG5Q9H1Y0 275 aa15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 KMT2CQ8NEZ4 4911 aaKnown RBP15.69■□□□□ 0.1
PDLIM4-206ENST00000474421 NBEAL2Q6ZNJ1 2754 aa15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 BRI3O95415 125 aa15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 ZP3P21754 424 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms