RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 MTFP1Q9UDX5 166 aa9.89□□□□□ -0.83
DDX56-209ENST00000473924 SH2D7A6NKC9 451 aaPredicted RBP9.88□□□□□ -0.83
DDX56-209ENST00000473924 CTDSPLO15194 276 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 AMY1AP04745 511 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 AMY2AP04746 511 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 IFNA6P05013 189 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 VDAC2P45880 294 aaPredicted RBP9.88□□□□□ -0.83
DDX56-209ENST00000473924 F2RL1P55085 397 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 RPS16P62249 146 aaKnown RBP9.88□□□□□ -0.83
DDX56-209ENST00000473924 TAGLNQ01995 201 aaKnown RBP9.88□□□□□ -0.83
DDX56-209ENST00000473924 RTL8BQ17RB0 113 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 RNASE10Q5GAN6 216 aaKnown RBP9.88□□□□□ -0.83
DDX56-209ENST00000473924 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 Q6ZS46 218 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 Q8N2B8 174 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 SMIM4Q8WVI0 70 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 C5orf30Q96GV9 206 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 ADTRPQ96IZ2 230 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 SLC5A7Q9GZV3 580 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 CCL28Q9NRJ3 127 aa9.88□□□□□ -0.83
DDX56-209ENST00000473924 RBMX2Q9Y388 322 aaKnown RBP9.88□□□□□ -0.83
DDX56-209ENST00000473924 M0QYG6 137 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 NBR2O15453 112 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 CD3DP04234 171 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 CSF1P09603 554 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 VSIG10L2P0DP72 767 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 RRASP10301 218 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 DUTP33316 252 aaKnown RBP9.87□□□□□ -0.83
DDX56-209ENST00000473924 PROK1P58294 105 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 TAS2R19P59542 299 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 SSBP1Q04837 148 aaKnown RBP9.87□□□□□ -0.83
DDX56-209ENST00000473924 PLGLAQ15195 96 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 PYDC2Q56P42 97 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 SPANXN2Q5MJ10 180 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 VAX1Q5SQQ9 334 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 KCTD9Q7L273 389 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 PDPNQ86YL7 162 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 Q8N9W7 124 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 BVESQ8NE79 360 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 BORCS5Q969J3 196 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 FLYWCH2Q96CP2 140 aaKnown RBP9.87□□□□□ -0.83
DDX56-209ENST00000473924 RITA1Q96K30 269 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 ZNF747Q9BV97 191 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 PLSCR3Q9NRY6 295 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 LIN7CQ9NUP9 197 aaKnown RBP9.87□□□□□ -0.83
DDX56-209ENST00000473924 TAS2R8Q9NYW2 309 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 PRELID3BQ9Y3B1 194 aa9.87□□□□□ -0.83
DDX56-209ENST00000473924 TNFSF12O43508 249 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 RAB3DO95716 219 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 IGLV2-14P01704 120 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 IGKV1-16P04430 117 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 TBPP20226 339 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 CNTFRP26992 372 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 TMEM95Q3KNT9 176 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 ZNF660Q6AZW8 331 aaPredicted RBP9.86□□□□□ -0.83
DDX56-209ENST00000473924 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 ZNF66Q6ZN08 573 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 FAM71E2Q8N5Q1 922 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 KLHDC1Q8N7A1 406 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 TMEM229BQ8NBD8 167 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 ZBTB34Q8NCN2 500 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 TCTEX1D2Q8WW35 142 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 WFDC12Q8WWY7 111 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 MOB3AQ96BX8 217 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 TSNAXQ99598 290 aaKnown RBP9.86□□□□□ -0.83
DDX56-209ENST00000473924 HSD17B10Q99714 261 aaKnown RBP9.86□□□□□ -0.83
DDX56-209ENST00000473924 RNF5Q99942 180 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 SOSTQ9BQB4 213 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 SERTAD4Q9NUC0 356 aa9.86□□□□□ -0.83
DDX56-209ENST00000473924 A6NHS1 94 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 LINC00473A8K010 186 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 GSTZ1O43708 216 aaPredicted RBP9.85□□□□□ -0.83
DDX56-209ENST00000473924 FCGR3BO75015 233 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 MSMO1Q15800 293 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 OR2B11Q5JQS5 317 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 STEAP1BQ6NZ63 245 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 LPCAT3Q6P1A2 487 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 ZNF818PQ6ZRF7 136 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 CCDC190Q86UF4 302 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 MFSD4AQ8N468 514 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 ARRDC1Q8N5I2 433 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 NPBQ8NG41 125 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 OR6Q1Q8NGQ2 317 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 HARBI1Q96MB7 349 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 TINAGL1Q9GZM7 467 aaPredicted RBP9.85□□□□□ -0.83
DDX56-209ENST00000473924 ZNF107Q9UII5 783 aaPredicted RBP9.85□□□□□ -0.83
DDX56-209ENST00000473924 V9GYH0 126 aa9.85□□□□□ -0.83
DDX56-209ENST00000473924 RRHO14718 337 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 SHOXO15266 292 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 KCNAB3O43448 404 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 NDUFA3O95167 84 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 CRYZL1O95825 349 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 IGHG2P01859 326 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 AKAIN1P0CW23 69 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 PTBP1P26599 531 aaKnown RBP eCLIP9.84□□□□□ -0.83
DDX56-209ENST00000473924 S100GP29377 79 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 GNRHRP30968 328 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 LGALS7P47929 136 aa9.84□□□□□ -0.83
DDX56-209ENST00000473924 RPL30P62888 115 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms