RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 DLX4Q92988 240 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-203ENST00000472892 RAB3CQ96E17 227 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 CLCC1Q96S66 551 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 FAM103A1Q9BTL3 118 aaKnown RBP11.82□□□□□ -0.52
VTI1A-203ENST00000472892 VCX3BQ9H321 246 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 PDCD5O14737 125 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 FABP7O15540 132 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 CA2P00918 260 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 CD3GP09693 182 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 HSPA13P48723 471 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 ZNF367Q7RTV3 350 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 OR10R2Q8NGX6 335 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 ABHD5Q8WTS1 349 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
VTI1A-203ENST00000472892 RHOVQ96L33 236 aa11.81□□□□□ -0.52
VTI1A-203ENST00000472892 IGHV4OR15-8A0A075B7B6 117 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 A0A087WW49 117 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 TRBV6-7A0A0A0MS04 114 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 TRDV1A0A1B0GX56 115 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 IFITM5A6NNB3 132 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 M0R1X1 148 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 RAB27BO00194 218 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 DIRAS3O95661 229 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 APOA2P02652 100 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 HSPB1P04792 205 aaKnown RBP11.8□□□□□ -0.52
VTI1A-203ENST00000472892 FCGR3AP08637 254 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 GSTT2P0CG29 244 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 GSTT2BP0CG30 244 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 RAB6AP20340 208 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 SLURP1P55000 103 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 OR10A3P58181 314 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 MRPS15P82914 257 aaKnown RBP11.8□□□□□ -0.52
VTI1A-203ENST00000472892 FXYD3Q14802 87 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 IGSF11Q5DX21 431 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 IZUMO2Q6UXV1 221 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 CNBD2Q96M20 576 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 MS4A10Q96PG2 267 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 CABLES2Q9BTV7 478 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 SLA2Q9H6Q3 261 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 NDUFB11Q9NX14 153 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 U3KQK5 164 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 NBEAL2Q6ZNJ1 2754 aa11.8□□□□□ -0.52
VTI1A-203ENST00000472892 ERICH4A6NGS2 130 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 MFNGO00587 321 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 ARPC1BO15143 372 aaKnown RBP11.79□□□□□ -0.52
VTI1A-203ENST00000472892 BET1O15155 118 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 SLC25A17O43808 307 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 IGLV2-23P01705 113 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 CRYGBP07316 175 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 OR8U9P0C7N5 309 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 GNB3P16520 340 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 CD40LGP29965 261 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 LGALS7P47929 136 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-203ENST00000472892 SRSF7Q16629 238 aaKnown RBP eCLIP11.79□□□□□ -0.52
VTI1A-203ENST00000472892 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 OR10J5Q8NHC4 309 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 ARPC1AQ92747 370 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 SLC35D1Q9NTN3 355 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 SDHAF2Q9NX18 166 aa11.79□□□□□ -0.52
VTI1A-203ENST00000472892 SAP30O75446 220 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 HIST1H1DP16402 221 aaKnown RBP11.78□□□□□ -0.52
VTI1A-203ENST00000472892 GALP22466 123 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 GADD45AP24522 165 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 TPPP2P59282 170 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 TAGLNQ01995 201 aaKnown RBP11.78□□□□□ -0.52
VTI1A-203ENST00000472892 OR2D2Q9H210 308 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 ZNF230Q9UIE0 474 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-203ENST00000472892 SMAD5-AS1Q9Y6J3 95 aa11.78□□□□□ -0.52
VTI1A-203ENST00000472892 METTL21EPA6NDL7 271 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 H3BUA1 57 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 LY86O95711 162 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 TRGV3P03979 118 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 RAB3BP20337 219 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 MYL9P24844 172 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 TMEM177Q53S58 311 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 Q6ZS49 121 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 NR2C2APQ86WQ0 139 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 GRPEL2Q8TAA5 225 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 MAFIPQ8WZ33 124 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 C5orf30Q96GV9 206 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 ASCL2Q99929 193 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 CENPOQ9BU64 300 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 RAB26Q9ULW5 256 aa11.77□□□□□ -0.53
VTI1A-203ENST00000472892 A0A075B6Q4 140 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 A0A0B4J203 849 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 SRRM4A7MD48 611 aaKnown RBP11.76□□□□□ -0.53
VTI1A-203ENST00000472892 MRPS14O60783 128 aaKnown RBP11.76□□□□□ -0.53
VTI1A-203ENST00000472892 CNIH1O95406 144 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 BRI3O95415 125 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 SPNP16150 400 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 POC5Q8NA72 575 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 OR5T1Q8NG75 326 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms