RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 RIMS4Q9H426 269 aaPredicted RBP2.7□□□□□ -1.98
XRN1-209ENST00000472625 AAMDCQ9H7C9 122 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 TUBA4BQ9H853 241 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 SEPSECSQ9HD40 501 aaKnown RBP2.7□□□□□ -1.98
XRN1-209ENST00000472625 RANGRFQ9HD47 186 aaPredicted RBP2.7□□□□□ -1.98
XRN1-209ENST00000472625 OR2S2Q9NQN1 319 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 ZNF446Q9NWS9 450 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 RCC2Q9P258 522 aaKnown RBP2.7□□□□□ -1.98
XRN1-209ENST00000472625 PEMTQ9UBM1 199 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 LINC00527Q9UJ94 153 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 RPL36Q9Y3U8 105 aaKnown RBP2.7□□□□□ -1.98
XRN1-209ENST00000472625 AP4S1Q9Y587 144 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 WSB1Q9Y6I7 421 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 HYDINQ4G0P3 5121 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 ALMS1Q8TCU4 4167 aa2.7□□□□□ -1.98
XRN1-209ENST00000472625 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 IGHV3-72A0A0B4J1Y9 119 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 A0A0B4J203 849 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 C13orf42A0A1B0GVH6 325 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 A0A1W2PN81 502 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 C12orf77C9JDV5 145 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 C15orf65H3BRN8 121 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 J3QRE1 110 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ITGB1BP1O14713 200 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 GEMIN2O14893 280 aaKnown RBP2.69□□□□□ -1.98
XRN1-209ENST00000472625 RAB29O14966 203 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ATP6V0E1O15342 81 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 MAGEB4O15481 346 aaPredicted RBP2.69□□□□□ -1.98
XRN1-209ENST00000472625 YPEL1O60688 119 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 GPX5O75715 221 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SC5DO75845 299 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ACTL6BO94805 426 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 OR2A4O95047 310 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 NDUFA3O95167 84 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 BRI3O95415 125 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 IGLV1-51P01701 117 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 HBZP02008 142 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 APOA2P02652 100 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 HSPB1P04792 205 aaKnown RBP2.69□□□□□ -1.98
XRN1-209ENST00000472625 IGHV4-30-4P0DP06 118 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 CALCBP10092 127 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ARSBP15848 533 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SPNP16150 400 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 DCKP27707 260 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 CHRNA7P36544 502 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 LGALS7P47929 136 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ALDH3A2P51648 485 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SSX1Q16384 188 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ECSCRQ19T08 205 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 PIGYQ3MUY2 71 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 Q499Y3 187 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SLC22A6Q4U2R8 563 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 AKIRIN2Q53H80 203 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SYT6Q5T7P8 510 aaPredicted RBP2.69□□□□□ -1.98
XRN1-209ENST00000472625 C1orf146Q5VVC0 180 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 LPCAT4Q643R3 524 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 RAB12Q6IQ22 244 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ZFP1Q6P2D0 407 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 BAIAP2L2Q6UXY1 529 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ASCL4Q6XD76 172 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ZNF833PQ6ZTB9 187 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 C18orf65Q6ZTR6 163 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SBSPONQ8IVN8 264 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 GAPTQ8N292 157 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 TMEM217Q8N7C4 229 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 NPBQ8NG41 125 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 OR51A4Q8NGJ6 313 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 ARPC1AQ92747 370 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 GHSRQ92847 366 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 LEAP2Q969E1 77 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SMIM19Q96E16 107 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 DUX3Q96PT4 197 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 YPEL2Q96QA6 119 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SPACA5Q96QH8 159 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 TSNAXQ99598 290 aaKnown RBP2.69□□□□□ -1.98
XRN1-209ENST00000472625 ASCL2Q99929 193 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 HSPB9Q9BQS6 159 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 UQCC2Q9BRT2 126 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 PLSCR3Q9NRY6 295 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SLC2A8Q9NY64 477 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SIGLEC8Q9NYZ4 499 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 EXOGQ9Y2C4 368 aaKnown RBP2.69□□□□□ -1.98
XRN1-209ENST00000472625 WASHC3Q9Y3C0 194 aa2.69□□□□□ -1.98
XRN1-209ENST00000472625 SAA2-SAA4A0A096LPE2 208 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 IGHV7-81A0A0B4J1V7 117 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 A0A1W2PPE3 182 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 H7C2Y5 167 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 M0R129 80 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 RHODO00212 210 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 MITFO75030 526 aaPredicted RBP2.68□□□□□ -1.98
XRN1-209ENST00000472625 PDCD6O75340 191 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 CRTAPO75718 401 aaPredicted RBP2.68□□□□□ -1.98
XRN1-209ENST00000472625 TPPPO94811 219 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 CNIH1O95406 144 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 DIRAS3O95661 229 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 IGHV3-7P01780 117 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 MT-ND4P03905 459 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 TRGV3P03979 118 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 MAS1P04201 325 aa2.68□□□□□ -1.98
XRN1-209ENST00000472625 GSTT2P0CG29 244 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms